RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 NAT16Q8N8M0 369 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 P2RY11Q96G91 374 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 PRICKLE1Q96MT3 831 aaPredicted RBP17.05■□□□□ 0.32
LINC00398-201ENST00000414407 BAG1Q99933 345 aaPredicted RBP17.05■□□□□ 0.32
LINC00398-201ENST00000414407 NUP85Q9BW27 656 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 LMAN1LQ9HAT1 526 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 FBRSL1Q9HCM7 1045 aaKnown RBP17.05■□□□□ 0.32
LINC00398-201ENST00000414407 ARHGEF4Q9NR80 690 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 DNAJC17Q9NVM6 304 aaKnown RBP17.05■□□□□ 0.32
LINC00398-201ENST00000414407 PLK2Q9NYY3 685 aa17.05■□□□□ 0.32
LINC00398-201ENST00000414407 EIF3CLB5ME19 914 aaKnown RBP17.04■□□□□ 0.32
LINC00398-201ENST00000414407 I6L893 689 aaPredicted RBP17.04■□□□□ 0.32
LINC00398-201ENST00000414407 RNF8O76064 485 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 CISD3P0C7P0 127 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 AVPR2P30518 371 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 TNFRSF4P43489 277 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 DGKGP49619 791 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 MRE11P49959 708 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 NRG1Q02297 640 aaPredicted RBP17.04■□□□□ 0.32
LINC00398-201ENST00000414407 ZNF252P-AS1Q0IIN9 211 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 SCAPQ12770 1279 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 PIGHQ14442 188 aaPredicted RBP17.04■□□□□ 0.32
LINC00398-201ENST00000414407 RABGAP1LQ5R372 815 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 FBXL22Q6P050 247 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 MAMSTRQ6ZN01 415 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 LGI2Q8N0V4 545 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 TMEM105Q8N8V8 129 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 BHMTQ93088 406 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 ARHGEF26Q96DR7 871 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 EIF3CQ99613 913 aaKnown RBP17.04■□□□□ 0.32
LINC00398-201ENST00000414407 PACSIN1Q9BY11 444 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 OSBPL2Q9H1P3 480 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 LUC7LQ9NQ29 371 aaKnown RBP17.04■□□□□ 0.32
LINC00398-201ENST00000414407 ANLNQ9NQW6 1124 aa17.04■□□□□ 0.32
LINC00398-201ENST00000414407 TBL1XO60907 577 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 PCK1P35558 622 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 TCEAL1Q15170 157 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 SPA17Q15506 151 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 RAB6CQ53S08 254 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 LRRC31Q6UY01 552 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 SLFN11Q7Z7L1 901 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 TMEM139Q8IV31 216 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 RHOT2Q8IXI1 618 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 NIPA2Q8N8Q9 360 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 TERB1Q8NA31 727 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 ZNF564Q8TBZ8 553 aaPredicted RBP17.03■□□□□ 0.32
LINC00398-201ENST00000414407 TRIM7Q9C029 511 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 RAB6CQ9H0N0 254 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 CHRDQ9H2X0 955 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 CTTNBP2NLQ9P2B4 639 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 IP6K2Q9UHH9 426 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 ANAPC7Q9UJX3 599 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 EPN1Q9Y6I3 576 aaPredicted RBP17.03■□□□□ 0.32
LINC00398-201ENST00000414407 MYOFQ9NZM1 2061 aa17.03■□□□□ 0.32
LINC00398-201ENST00000414407 SOWAHDA6NJG2 315 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 DRGXA6NNA5 263 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 K7EQS6 105 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 MYO1FO00160 1098 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 NDUFA10O95299 355 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 IPO7O95373 1038 aaKnown RBP17.02■□□□□ 0.32
LINC00398-201ENST00000414407 EGFP01133 1207 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 DCNP07585 359 aaKnown RBP17.02■□□□□ 0.32
LINC00398-201ENST00000414407 MAGEA1P43355 309 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 SGSHP51688 502 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 RPS24P62847 133 aaKnown RBP17.02■□□□□ 0.32
LINC00398-201ENST00000414407 CCDC117Q8IWD4 279 aaPredicted RBP17.02■□□□□ 0.32
LINC00398-201ENST00000414407 ZNF683Q8IZ20 524 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC00398-201ENST00000414407 FIBINQ8TAL6 211 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 KCNV2Q8TDN2 545 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 EZH1Q92800 747 aaPredicted RBP17.02■□□□□ 0.32
LINC00398-201ENST00000414407 MYEOVQ96EZ4 313 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 RPRD1AQ96P16 312 aaPredicted RBP17.02■□□□□ 0.32
LINC00398-201ENST00000414407 SIK2Q9H0K1 926 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 RETREG1Q9H6L5 497 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 STARD13Q9Y3M8 1113 aa17.02■□□□□ 0.32
LINC00398-201ENST00000414407 IGLV3-10A0A075B6K4 115 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 A0A1B0GVM2 712 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 TBC1D3BA6NDS4 549 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 TCAF2A6NFQ2 919 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 CHURC1-FNTBB4DL54 471 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 MTA2O94776 668 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 LUC7L3O95232 432 aaKnown RBP17.01■□□□□ 0.31
LINC00398-201ENST00000414407 KDSRQ06136 332 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 MESP2Q0VG99 397 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 E2F5Q15329 346 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 HSF5Q4G112 596 aaPredicted RBP17.01■□□□□ 0.31
LINC00398-201ENST00000414407 EFHC2Q5JST6 749 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 SCYL2Q6P3W7 929 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 CHST9Q7L1S5 443 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 KIAA0907Q7Z7F0 614 aaPredicted RBP17.01■□□□□ 0.31
LINC00398-201ENST00000414407 PSTKQ8IV42 348 aaKnown RBP17.01■□□□□ 0.31
LINC00398-201ENST00000414407 MFN1Q8IWA4 741 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 ARFGAP1Q8N6T3 406 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 CCDC185Q8N715 623 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 RFFLQ8WZ73 363 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 IGSF8Q969P0 613 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 TMPRSS4Q9NRS4 437 aa17.01■□□□□ 0.31
LINC00398-201ENST00000414407 RBM12Q9NTZ6 932 aaKnown RBP17.01■□□□□ 0.31
LINC00398-201ENST00000414407 PPARGC1AQ9UBK2 798 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms