RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ECHS1P30084 290 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 CDC25CP30307 473 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 SERPINB6P35237 376 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 NR2C2P49116 596 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 KCNQ1P51787 676 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 EPHA5P54756 1037 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 GDF10P55107 478 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 CYP4F8P98187 520 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 SLC10A2Q12908 348 aaPredicted RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 CUL1Q13616 776 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 DUSP6Q16828 381 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 MS4A13Q5J8X5 152 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 ACBD5Q5T8D3 534 aaPredicted RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 DUPD1Q68J44 220 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 NADSYN1Q6IA69 706 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 RWDD4Q6NW29 188 aaKnown RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 TMCO3Q6UWJ1 677 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 MAMSTRQ6ZN01 415 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 GAREM2Q75VX8 874 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 GSTA5Q7RTV2 222 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 ZC3H18Q86VM9 953 aaKnown RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 CDKL3Q8IVW4 592 aaPredicted RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 ZNF683Q8IZ20 524 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 HS6ST3Q8IZP7 471 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 NPWQ8N729 165 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 EIF1ADQ8N9N8 165 aaKnown RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 GLIS1Q8NBF1 620 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 MRPS31Q92665 395 aaKnown RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 TIFAQ96CG3 184 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 ZFRQ96KR1 1074 aaKnown RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 C1orf74Q96LT6 269 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 GCNAQ96QF7 691 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 PRMT1Q99873 361 aaKnown RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 HINFPQ9BQA5 517 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 CORO1BQ9BR76 489 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 ERP44Q9BS26 406 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 KLF16Q9BXK1 252 aaPredicted RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 TRIM31Q9BZY9 425 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 SIK2Q9H0K1 926 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 DPH5Q9H2P9 285 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 PCDH9Q9HC56 1237 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 TRPC7Q9HCX4 862 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 FAM114A2Q9NRY5 505 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 HCFC1R1Q9NWW0 138 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 ZDHHC7Q9NXF8 308 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 DPP7Q9UHL4 492 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 FEZ2Q9UHY8 353 aaPredicted RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 ZNF148Q9UQR1 794 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 DRG1Q9Y295 367 aaKnown RBP6.86□□□□□ -1.31
VPS41-204ENST00000413141 HCFC2Q9Y5Z7 792 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 LAMA3Q16787 3333 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 DENND4CQ5VZ89 1909 aa6.86□□□□□ -1.31
VPS41-204ENST00000413141 IGLV3-10A0A075B6K4 115 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 A0A1W2PRU2 124 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 BCLAF3A2AJT9 711 aaKnown RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 CFAP69A5D8W1 941 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 WASH4PA8MWX3 477 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 HACD1B0YJ81 288 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 H7C0C1 242 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 PPP1R12AO14974 1030 aaPredicted RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 PER2O15055 1255 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 XYLBO75191 536 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 STC2O76061 302 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 KRT14P02533 472 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 SRGAP2BP0DMP2 458 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 IRF1P10914 325 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 MBL2P11226 248 aaPredicted RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 MYL4P12829 197 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 VAV1P15498 845 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 PFKLP17858 780 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 TACR2P21452 398 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 CORO1AP31146 461 aaKnown RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 CCR2P41597 374 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 RPL21P46778 160 aaKnown RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 ATP5OP48047 213 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 NRIP1P48552 1158 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 CARSP49589 748 aaKnown RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 HARS2P49590 506 aaKnown RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 IRAK1P51617 712 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 MLLT6P55198 1093 aaPredicted RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 COG7P83436 770 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 SMAD3P84022 425 aaKnown RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 RBM10P98175 930 aaKnown RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 XRCC4Q13426 336 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 AUHQ13825 339 aaKnown RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 PRKD1Q15139 912 aaPredicted RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 TRADDQ15628 312 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 TRIP13Q15645 432 aaPredicted RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 MAP9Q49MG5 647 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 SLC45A4Q5BKX6 768 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 FAM133BQ5BKY9 247 aaKnown RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 STXBP5Q5T5C0 1151 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 RAP1GAP2Q684P5 730 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 TXNDC8Q6A555 127 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 DARS2Q6PI48 645 aaKnown RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 ELMSAN1Q6PJG2 1045 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 ZDHHC24Q6UX98 284 aa6.85□□□□□ -1.31
VPS41-204ENST00000413141 CCNI2Q6ZMN8 369 aaPredicted RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 PDZD4Q76G19 769 aaPredicted RBP6.85□□□□□ -1.31
VPS41-204ENST00000413141 B4GALNT4Q76KP1 1039 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms