RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 ABCB8Q9NUT2 735 aa9.53□□□□□ -0.88
BRCC3-207ENST00000411985 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.53□□□□□ -0.88
BRCC3-207ENST00000411985 DLL3Q9NYJ7 618 aa9.53□□□□□ -0.88
BRCC3-207ENST00000411985 CALCOCO1Q9P1Z2 691 aa9.53□□□□□ -0.88
BRCC3-207ENST00000411985 LIMA1Q9UHB6 759 aaKnown RBP9.53□□□□□ -0.88
BRCC3-207ENST00000411985 GGA2Q9UJY4 613 aa9.53□□□□□ -0.88
BRCC3-207ENST00000411985 NUMA1Q14980 2115 aa9.53□□□□□ -0.88
BRCC3-207ENST00000411985 SYNJ2BP-COX16A0A087WUM0 186 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 LGALS16A8MUM7 142 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 KCNU1A8MYU2 1149 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 TIMM44O43615 452 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 ZNF217O75362 1048 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 GFPT2O94808 682 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 LSM8O95777 96 aaKnown RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 MMEP08473 750 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 SLC2A3P11169 496 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 PABPC1P11940 636 aaKnown RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 ZNF18P17022 549 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 CDK11BP21127 795 aaKnown RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 CCR1P32246 355 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 NOS2P35228 1153 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 GABRB2P47870 512 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 DHPSP49366 369 aaPredicted RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 JAM2P57087 298 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 POLR2FP61218 127 aaKnown RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 CDK17Q00537 523 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 UBXN1Q04323 297 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 PUM1Q14671 1186 aaKnown RBP eCLIP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 FUT11Q495W5 492 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 ANO6Q4KMQ2 910 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 AASDHQ4L235 1098 aaPredicted RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 ZC3H12AQ5D1E8 599 aaKnown RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 MS4A13Q5J8X5 152 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 SPDYCQ5MJ68 293 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 RAP1GAP2Q684P5 730 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 CAVIN1Q6NZI2 390 aaKnown RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 SERPINA13PQ6UXR4 307 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 CHST9Q7L1S5 443 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 LPCAT2Q7L5N7 544 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 KIAA0907Q7Z7F0 614 aaPredicted RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 ADIPOR2Q86V24 386 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 ERICH1Q86X53 443 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 ZNF677Q86XU0 584 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 CCDC117Q8IWD4 279 aaPredicted RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 AOPEPQ8N6M6 819 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 MSANTD4Q8NCY6 345 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 ZNF397Q8NF99 534 aaPredicted RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 NEK11Q8NG66 645 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 NETO1Q8TDF5 533 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 SORCS1Q8WY21 1168 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 MRGPRX1Q96LB2 322 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 PCMTD1Q96MG8 357 aaPredicted RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 SPAG5Q96R06 1193 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 BPIFA3Q9BQP9 254 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 HSD3B7Q9H2F3 369 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 NLRC4Q9NPP4 1024 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 VPS45Q9NRW7 570 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 DDIT4Q9NX09 232 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 COX16Q9P0S2 106 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 STIM2Q9P246 746 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 SLC12A6Q9UHW9 1150 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 XPO7Q9UIA9 1087 aaKnown RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 MBD1Q9UIS9 605 aaPredicted RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 CDV3Q9UKY7 258 aaKnown RBP9.52□□□□□ -0.89
BRCC3-207ENST00000411985 SIK3Q9Y2K2 1263 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 GPR179Q6PRD1 2367 aa9.52□□□□□ -0.89
BRCC3-207ENST00000411985 CEP250Q9BV73 2442 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 IGHV1OR15-9A0A0B4J2B8 117 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-207ENST00000411985 BCLAF3A2AJT9 711 aaKnown RBP9.51□□□□□ -0.89
BRCC3-207ENST00000411985 LRRC10BA6NIK2 292 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 F5H5T6 163 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 M0QYT0 321 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 EPHB6O15197 1021 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 AP5Z1O43299 807 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 SYNCRIPO60506 623 aaKnown RBP9.51□□□□□ -0.89
BRCC3-207ENST00000411985 LUC7L3O95232 432 aaKnown RBP9.51□□□□□ -0.89
BRCC3-207ENST00000411985 CAVIN2O95810 425 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 ATP5BP06576 529 aaKnown RBP9.51□□□□□ -0.89
BRCC3-207ENST00000411985 EPHX1P07099 455 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 POLR2EP19388 210 aaKnown RBP9.51□□□□□ -0.89
BRCC3-207ENST00000411985 ABCB4P21439 1286 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 TACR2P21452 398 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 PRKCHP24723 683 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 CD70P32970 193 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 SOX5P35711 763 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 SCNN1AP37088 669 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 STAT1P42224 750 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 MATKP42679 507 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 RPS24P62847 133 aaKnown RBP9.51□□□□□ -0.89
BRCC3-207ENST00000411985 NOMO3P69849 1222 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 LMAN2Q12907 356 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 NME3Q13232 169 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 MTA1Q13330 715 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 CDH18Q13634 790 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 SF3A2Q15428 464 aaKnown RBP9.51□□□□□ -0.89
BRCC3-207ENST00000411985 SYCP1Q15431 976 aa9.51□□□□□ -0.89
BRCC3-207ENST00000411985 FNDC3BQ53EP0 1204 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms