RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 CASKIN2Q8WXE0 1202 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 TEKT1Q969V4 418 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 HIC2Q96JB3 615 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 SYT15Q9BQS2 421 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 FDXACB1Q9BRP7 624 aaPredicted RBP5.73□□□□□ -1.49
CLK1-202ENST00000409403 VPS16Q9H269 839 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 FOXP1Q9H334 677 aaPredicted RBP5.73□□□□□ -1.49
CLK1-202ENST00000409403 NRDE2Q9H7Z3 1164 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 DCLRE1BQ9H816 532 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 OBP2AQ9NY56 170 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 TAB2Q9NYJ8 693 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 AIPL1Q9NZN9 384 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 SPATA7Q9P0W8 599 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 SERPINB13Q9UIV8 391 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 MAGEL2Q9UJ55 1249 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 FBXO2Q9UK22 296 aaPredicted RBP5.73□□□□□ -1.49
CLK1-202ENST00000409403 BZW2Q9Y6E2 419 aaKnown RBP5.73□□□□□ -1.49
CLK1-202ENST00000409403 FAM205AQ6ZU69 1335 aa5.73□□□□□ -1.49
CLK1-202ENST00000409403 MYO9BQ13459 2157 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 A0A0A6YYK5 440 aaPredicted RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 MANSC4A6NHS7 340 aaPredicted RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 ETV2O00321 342 aaPredicted RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 WDR46O15213 610 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 TPD52L2O43399 206 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 AP1G1O43747 822 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SGPL1O95470 568 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 OAS1P00973 400 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 KRT18P05783 430 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 PDHA1P08559 390 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 KRT16P08779 473 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 POU2F2P09086 479 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 TPBGLP0DKB5 382 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 HARSP12081 509 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 GLDCP23378 1020 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 TMOD1P28289 359 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 HOXA7P31268 230 aaPredicted RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 MMP13P45452 471 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 ACADVLP49748 655 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 METAP2P50579 478 aaKnown RBP eCLIP5.72□□□□□ -1.49
CLK1-202ENST00000409403 STX17P56962 302 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 KCNJ2P63252 427 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 PHEXP78562 749 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 ACVR2BQ13705 512 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 ITGA9Q13797 1035 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 PRKG1Q13976 671 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 CCDC6Q16204 474 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 FAM153CQ494X1 144 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 PRR31Q5SQ13 230 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 FKBP15Q5T1M5 1219 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SFMBT2Q5VUG0 894 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 INTS8Q75QN2 995 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 ST13P4Q8IZP2 240 aaPredicted RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 GLB1L3Q8NCI6 653 aaPredicted RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 NCOA7Q8NI08 942 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 PPP1R14CQ8TAE6 165 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 ERMNQ8TAM6 284 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SLC35G2Q8TBE7 412 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SNRNP27Q8WVK2 155 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 ZCCHC14Q8WYQ9 949 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 HAPLN3Q96S86 360 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 ELAC2Q9BQ52 826 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 UBAC1Q9BSL1 405 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SOX7Q9BT81 388 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 EDEM3Q9BZQ6 932 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 LRMDAQ9H2I8 198 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SLITRK6Q9H5Y7 841 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 GREM2Q9H772 168 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 PREBQ9HCU5 417 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 LRWD1Q9UFC0 647 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 FAM153AQ9UHL3 310 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 STK38LQ9Y2H1 464 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 PCDHA13Q9Y5I0 950 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 TPRP12270 2363 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 UTYO14607 1347 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 DUOX1Q9NRD9 1551 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 PSME4Q14997 1843 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SMIM31A0A1B0GVY4 71 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 BICDL2A1A5D9 508 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 CCDC162PA2VCL2 907 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 ECE2O60344 883 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 TJP3O95049 919 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 UNC5CO95185 931 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 MBD4O95243 580 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 DDX58O95786 925 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 ZFYP08048 801 aaPredicted RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 NUDT17P0C025 328 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 CHN1P15882 459 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SMARCA1P28370 1054 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 CDC25CP30307 473 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 CLCN2P51788 898 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 CACNA2D1P54289 1103 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 MGAT5Q09328 741 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 EIF4HQ15056 248 aaKnown RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 MAN2A1Q16706 1144 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 ZNF658Q5TYW1 1059 aaPredicted RBP5.72□□□□□ -1.49
CLK1-202ENST00000409403 RRAGBQ5VZM2 374 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 OTUD7BQ6GQQ9 843 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 NFRKBQ6P4R8 1299 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 LILRA6Q6PI73 481 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 WDR59Q6PJI9 974 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms