RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 RCOR2Q8IZ40 523 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 DCAF4Q8WV16 495 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 THAP11Q96EK4 314 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 CNBD2Q96M20 576 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 TUBA1CQ9BQE3 449 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 REEP2Q9BRK0 252 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 PDZD7Q9H5P4 517 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 RIC8BQ9NVN3 520 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 ARHGAP26Q9UNA1 814 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 TNFRSF10AO00220 468 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 KMOO15229 486 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 SPTLC1O15269 473 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 PLA2G6O60733 806 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 SNHG28P0DPA3 235 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 RALAP11233 206 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 COL6A1P12109 1028 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 ZNF26P17031 533 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 ITGAXP20702 1163 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 ADSLP30566 484 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 AQP5P55064 265 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 SNRPFP62306 86 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 SLC25A3Q00325 362 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 ZNF543Q08ER8 600 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 EFTUD2Q15029 972 aaKnown RBP eCLIP10.92□□□□□ -0.662e-11■■■■■ 41.9
NIF3L1-204ENST00000409357 OASLQ15646 514 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 LRRC38Q5VT99 294 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 AGAP7PQ5VUJ5 663 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 TTC23LQ6PF05 361 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 NECAB2Q7Z6G3 386 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 AMIGO2Q86SJ2 522 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 FAM160B2Q86V87 743 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 ARID3BQ8IVW6 561 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 PPIL6Q8IXY8 311 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 TTC39CQ8N584 583 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 CHURC1Q8WUH1 139 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 KBTBD7Q8WVZ9 684 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 SHC3Q92529 594 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 DHX38Q92620 1227 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 C12orf43Q96C57 262 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 DUS3LQ96G46 650 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 FAM111AQ96PZ2 611 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 HERPUD2Q9BSE4 406 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 TINF2Q9BSI4 451 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 C1orf50Q9BV19 199 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 RNF146Q9NTX7 359 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 APPL1Q9UKG1 709 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 APOBEC2Q9Y235 224 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 RNF11Q9Y3C5 154 aa10.92□□□□□ -0.66
NIF3L1-204ENST00000409357 PSMD12O00232 456 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 COPEO14579 308 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 SNAI1O95863 264 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 GLRA2P23416 452 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 CIITAP33076 1130 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 SLC5A3P53794 718 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 OAZ1P54368 228 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 ENPEPQ07075 957 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 GALNT2Q10471 571 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 FASTKD3Q14CZ7 662 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 ARHGAP44Q17R89 818 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 LSM12Q3MHD2 195 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 ANKDD1AQ495B1 522 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 SMUG1Q53HV7 270 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 HP1BP3Q5SSJ5 553 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 TTC39BQ5VTQ0 682 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 SLX4IPQ5VYV7 408 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 GSTA5Q7RTV2 222 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 ZNF677Q86XU0 584 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 POU5F2Q8N7G0 328 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 TNIP2Q8NFZ5 429 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 TOP1MTQ969P6 601 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 TTC17Q96AE7 1141 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 VCPIP1Q96JH7 1222 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 ACAP3Q96P50 834 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 YTHDF1Q9BYJ9 559 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 ANKRD60Q9BZ19 345 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 FRMD8Q9BZ67 464 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 UBE2TQ9NPD8 197 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 MAN1C1Q9NR34 630 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 TRNAU1APQ9NX07 287 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 TMEM260Q9NX78 707 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 TIMM22Q9Y584 194 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 NOX1Q9Y5S8 564 aa10.91□□□□□ -0.66
NIF3L1-204ENST00000409357 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 SEPT4O43236 478 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 GALR2O43603 387 aaPredicted RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 IDH3BO43837 385 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 TBCAO75347 108 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 MED24O75448 989 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 DGKIO75912 1065 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 SLITRK3O94933 977 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 LDHAP00338 332 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 PROCP04070 461 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 BPGMP07738 259 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 ZNF865P0CJ78 1059 aaPredicted RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 NMT1P30419 496 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 GNL1P36915 607 aaPredicted RBP10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 PCYT1AP49585 367 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 NUMBP49757 651 aa10.9□□□□□ -0.66
NIF3L1-204ENST00000409357 HSD17B4P51659 736 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms