RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 NME7Q9Y5B8 376 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 PCDHGA1Q9Y5H4 931 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 APC2O95996 2303 aa8.1□□□□□ -1.11
LSM5-202ENST00000409292 SLC12A8A0AV02 714 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 LRRC72A6NJI9 287 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 MDM4O15151 490 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 POLR2DO15514 142 aaKnown RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 STX10O60499 249 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 GREM1O60565 184 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 MAGEC1O60732 1142 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 BEST1O76090 585 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 YEATS4O95619 227 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 LDOC1O95751 146 aaPredicted RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 ASS1P00966 412 aaKnown RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 SLFN14P0C7P3 912 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 POLR2EP19388 210 aaKnown RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 RPL13P26373 211 aaKnown RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 HOXD13P35453 343 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 NASPP49321 788 aaPredicted RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 CASP4P49662 377 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 KIF11P52732 1056 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 RACK1P63244 317 aaKnown RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 CLDN10P78369 228 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 PTK2Q05397 1052 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 ENPP2Q13822 863 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 NR6A1Q15406 480 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 SMAD1Q15797 465 aaKnown RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 ZACNQ401N2 412 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 C8orf34Q49A92 452 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 FYB2Q5VWT5 728 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 ZNF776Q68DI1 518 aaPredicted RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 FAM173BQ6P4H8 233 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 DBX2Q6ZNG2 339 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 INTS8Q75QN2 995 aaKnown RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 SLC9A9Q8IVB4 645 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 AHI1Q8N157 1196 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 LINC00528Q8N1L1 170 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 OXR1Q8N573 874 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 C12orf29Q8N999 325 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 LINC00301Q8NCQ3 95 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 ZMIZ2Q8NF64 920 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 WBP2Q969T9 261 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 TMA16Q96EY4 203 aaKnown RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 CCDC34Q96HJ3 373 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 IPO9Q96P70 1041 aaKnown RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 DUSP16Q9BY84 665 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 UBXN6Q9BZV1 441 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 NIF3L1Q9GZT8 377 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 NMUR1Q9HB89 426 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 LRRC4Q9HBW1 653 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 TM9SF3Q9HD45 589 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 CD93Q9NPY3 652 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 PGPEP1Q9NXJ5 209 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 HESX1Q9UBX0 185 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 HBS1LQ9Y450 684 aaKnown RBP8.09□□□□□ -1.11
LSM5-202ENST00000409292 SNX11Q9Y5W9 270 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 ZFHX4Q86UP3 3567 aa8.09□□□□□ -1.11
LSM5-202ENST00000409292 KNTC1P50748 2209 aa8.09□□□□□ -1.12
LSM5-202ENST00000409292 A0A087X0B3 334 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 KCNJ18B7U540 433 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 PDXKO00764 312 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 ENC1O14682 589 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 MAN1A2O60476 641 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 RFPL3O75679 317 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 MOCS3O95396 460 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 LATS1O95835 1130 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 HLA-DRAP01903 254 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 NR3C1P04150 777 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 BMP2P12643 396 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 CD58P19256 250 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 PRKCHP24723 683 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 NNMTP40261 264 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 AFMP43652 599 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 ME1P48163 572 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 SLC11A2P49281 568 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 VAMP7P51809 220 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 YWHAGP61981 247 aaKnown RBP eCLIP8.08□□□□□ -1.12
LSM5-202ENST00000409292 YWHAEP62258 255 aaKnown RBP8.08□□□□□ -1.12
LSM5-202ENST00000409292 DHX9Q08211 1270 aaKnown RBP8.08□□□□□ -1.12
LSM5-202ENST00000409292 INCA1Q0VD86 236 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 CAMK2GQ13555 558 aaPredicted RBP8.08□□□□□ -1.12
LSM5-202ENST00000409292 CUL4AQ13619 759 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 RNF219Q5W0B1 726 aaPredicted RBP8.08□□□□□ -1.12
LSM5-202ENST00000409292 DHRS13Q6UX07 377 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 USP30Q70CQ3 517 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 SV2AQ7L0J3 742 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 CHST9Q7L1S5 443 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 ZNF605Q86T29 641 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 SIX6OS1Q8N1H7 587 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 BAHD1Q8TBE0 780 aaPredicted RBP8.08□□□□□ -1.12
LSM5-202ENST00000409292 PIP4K2CQ8TBX8 421 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 BIRC7Q96CA5 298 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 INTS4Q96HW7 963 aaKnown RBP8.08□□□□□ -1.12
LSM5-202ENST00000409292 FAXDC2Q96IV6 333 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 PIWIL1Q96J94 861 aaKnown RBP8.08□□□□□ -1.12
LSM5-202ENST00000409292 ELF4Q99607 663 aaPredicted RBP8.08□□□□□ -1.12
LSM5-202ENST00000409292 ARID3AQ99856 593 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 OMDQ99983 421 aa8.08□□□□□ -1.12
LSM5-202ENST00000409292 BACH2Q9BYV9 841 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms