RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 DOCK5Q9H7D0 1870 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 TMCC1O94876 653 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 LDHAP00338 332 aaKnown RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 JUNP05412 331 aaKnown RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 NFICP08651 508 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 CPA3P15088 417 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 GPD1P21695 349 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ABCE1P61221 599 aaKnown RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ITPRIPL1Q6GPH6 555 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 PGM2L1Q6PCE3 622 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF534Q76KX8 674 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 KBTBD6Q86V97 674 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 DIS3LQ8TF46 1054 aaKnown RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 CLEC4CQ8WTT0 213 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 TMEM174Q8WUU8 243 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 EME1Q96AY2 570 aa9.83□□□□□ -0.84
SMC1B-202ENST00000404354 SNRNP25Q9BV90 132 aaKnown RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 C20orf96Q9NUD7 363 aaPredicted RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 FAF1Q9UNN5 650 aaPredicted RBP9.83□□□□□ -0.84
SMC1B-202ENST00000404354 KCNK1O00180 336 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 ATP9BO43861 1147 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 SERPINE1P05121 402 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 PRKCHP24723 683 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 STILQ15468 1287 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 MAP3K21Q5TCX8 1036 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 MAP1SQ66K74 1059 aaPredicted RBP9.82□□□□□ -0.84
SMC1B-202ENST00000404354 SLC9A4Q6AI14 798 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 PACS1Q6VY07 963 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 PNPLA1Q8N8W4 532 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 ATP6V1E2Q96A05 226 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 AKT1S1Q96B36 256 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 CCT7Q99832 543 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 PORCNQ9H237 461 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 CNTN6Q9UQ52 1028 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 GREB1LQ9C091 1923 aaPredicted RBP9.82□□□□□ -0.84
SMC1B-202ENST00000404354 SMIM31A0A1B0GVY4 71 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 TMEM233B4DJY2 109 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 PAPSS1O43252 624 aaPredicted RBP9.82□□□□□ -0.84
SMC1B-202ENST00000404354 TPST1O60507 370 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 TNNC2P02585 160 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 TPH1P17752 444 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 CCR3P51677 355 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 TAP1Q03518 808 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 PTPN11Q06124 597 aaPredicted RBP9.82□□□□□ -0.84
SMC1B-202ENST00000404354 VPS72Q15906 364 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 ACBD5Q5T8D3 534 aaPredicted RBP9.82□□□□□ -0.84
SMC1B-202ENST00000404354 ABHD15Q6UXT9 468 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 BRSK2Q8IWQ3 736 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 DSELQ8IZU8 1212 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 NIPA2Q8N8Q9 360 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 XYLT2Q9H1B5 865 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 C1orf21Q9H246 121 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 NRDE2Q9H7Z3 1164 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 UBP1Q9NZI7 540 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 GMPR2Q9P2T1 348 aaKnown RBP9.82□□□□□ -0.84
SMC1B-202ENST00000404354 COPG2Q9UBF2 871 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 TMCO1Q9UM00 188 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 GINS2Q9Y248 185 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 NDC80O14777 642 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 SPAG6O75602 509 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 EGFRP00533 1210 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 CYP2F1P24903 491 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 PTPN7P35236 360 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 GABRB2P47870 512 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 RALGDSQ12967 914 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 PITRM1Q5JRX3 1037 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 RARS2Q5T160 578 aaKnown RBP9.82□□□□□ -0.84
SMC1B-202ENST00000404354 WDR78Q5VTH9 848 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 STYK1Q6J9G0 422 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 RPS27LQ71UM5 84 aaKnown RBP9.82□□□□□ -0.84
SMC1B-202ENST00000404354 NIPA1Q7RTP0 329 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 CCNYL1Q8N7R7 359 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 TDRD5Q8NAT2 981 aaKnown RBP9.82□□□□□ -0.84
SMC1B-202ENST00000404354 SLC4A11Q8NBS3 891 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 PPWD1Q96BP3 646 aaKnown RBP9.82□□□□□ -0.84
SMC1B-202ENST00000404354 WRNIP1Q96S55 665 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 OMDQ99983 421 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 PCDH18Q9HCL0 1135 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 TCF7L2Q9NQB0 619 aa9.82□□□□□ -0.84
SMC1B-202ENST00000404354 COL24A1Q17RW2 1714 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 PHGDHO43175 533 aaKnown RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ATG7O95352 703 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 OATP04181 439 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 MTTPP55157 894 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ART3Q13508 389 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 CEACAM7Q14002 265 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 C16orf72Q14CZ0 275 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 HEATR6Q6AI08 1181 aaKnown RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 CYP4V2Q6ZWL3 525 aaPredicted RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 SYBUQ9NX95 663 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 RBBP6Q7Z6E9 1792 aaKnown RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 KLRG2A4D1S0 409 aaPredicted RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 FAM159BA6NKW6 160 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 TK2O00142 265 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ZSCAN9O15535 394 aaPredicted RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 TRMUO75648 421 aaKnown RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 FBXO21O94952 628 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 DPP6P42658 865 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 EN1Q05925 392 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms