RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 TMEM110Q86TL2 294 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 NT5DC4Q86YG4 428 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 HASPINQ8TF76 798 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 CLPTM1LQ96KA5 538 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 SPATA13Q96N96 652 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 PLEKHG4BQ96PX9 1271 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 TINF2Q9BSI4 451 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 C16orf70Q9BSU1 422 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 MAF1Q9H063 256 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 ABHD16BQ9H3Z7 469 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 KRT82Q9NSB4 513 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 TAS2R1Q9NYW7 299 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 TLK1Q9UKI8 766 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 BLOC1S6Q9UL45 172 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 WDR81Q562E7 1941 aa7.91□□□□□ -1.14
HDAC9-201ENST00000401921 DFFAO00273 331 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 NVLO15381 856 aaKnown RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 HNRNPCL1O60812 293 aaKnown RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 LMNAP02545 664 aaKnown RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 MMP3P08254 477 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 FAM163BP0C2L3 166 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 FAM200BP0CF97 657 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 SMIM10L2AP0DMW4 78 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 SMIM10L2BP0DMW5 78 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 MX2P20592 715 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 FDFT1P37268 417 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 NR2C2P49116 596 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 ITKQ08881 620 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 UBAP2LQ14157 1087 aaKnown RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 PRKD1Q15139 912 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 FAM187BQ17R55 369 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 ARL13BQ3SXY8 428 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 HSP90AA5PQ58FG0 334 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 ACBD5Q5T8D3 534 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 RGS9BPQ6ZS82 235 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 GPR142Q7Z601 462 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 UNC93AQ86WB7 457 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 TNS4Q8IZW8 715 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 B3GALNT2Q8NCR0 500 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 TEKT4Q8WW24 435 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 LRRC39Q96DD0 335 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 MTBPQ96DY7 904 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 L3MBTL3Q96JM7 780 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 SLC4A5Q9BY07 1137 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 ULBP1Q9BZM6 244 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 SSU72Q9NP77 194 aaKnown RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 C20orf96Q9NUD7 363 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 DDX43Q9NXZ2 648 aaKnown RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 PCDHGA4Q9Y5G9 962 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 PCDHA11Q9Y5I1 949 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 DOCK1Q14185 1865 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 BTBD19C9JJ37 291 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 MDM4O15151 490 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 CFLARO15519 480 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 TREHO43280 583 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 MAP3K7O43318 606 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 PEX11AO75192 247 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 JCHAINP01591 159 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 C6orf222P0C671 652 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 USP17L7P0C7H9 530 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 TSHRP16473 764 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 MATKP42679 507 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 SEPT6Q14141 434 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 GPR162Q16538 588 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 SNX30Q5VWJ9 437 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 SLC26A9Q7LBE3 791 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 STRA8Q7Z7C7 330 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 ZDHHC17Q8IUH5 632 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 RBM12BQ8IXT5 1001 aaKnown RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 ZNF398Q8TD17 642 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 MMADHCQ9H3L0 296 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-201ENST00000401921 PLEKHA5Q9HAU0 1116 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 XPNPEP3Q9NQH7 507 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 ZNF358Q9NW07 568 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 SYBUQ9NX95 663 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 FETUBQ9UGM5 382 aa7.9□□□□□ -1.14
HDAC9-201ENST00000401921 CASTOR2A6NHX0 329 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 PRR5-ARHGAP8B1AHC4 643 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 STRNO43815 780 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 SNAI1O95863 264 aaPredicted RBP7.9□□□□□ -1.15
HDAC9-201ENST00000401921 SKIP12755 728 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 PTPN1P18031 435 aaKnown RBP7.9□□□□□ -1.15
HDAC9-201ENST00000401921 ERCC2P18074 760 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 GLRBP48167 497 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 SLC1A6P48664 564 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 SCNN1BP51168 640 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 ARHGAP8P85298 464 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 SLC18A2Q05940 514 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 CACNB2Q08289 660 aaPredicted RBP7.9□□□□□ -1.15
HDAC9-201ENST00000401921 DUSP28Q4G0W2 176 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 WASHC2DQ5SRD0 308 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 SYPL2Q5VXT5 272 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 C4orf22Q6V702 233 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 DNAJC14Q6Y2X3 702 aaPredicted RBP7.9□□□□□ -1.15
HDAC9-201ENST00000401921 PLEKHH3Q7Z736 793 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 TP53INP2Q8IXH6 220 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 LRRC52Q8N7C0 313 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 SLC26A7Q8TE54 656 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 AZIN2Q96A70 460 aa7.9□□□□□ -1.15
HDAC9-201ENST00000401921 SNX27Q96L92 541 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms