RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 LRRC4Q9HBW1 653 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 OLA1Q9NTK5 396 aaKnown RBP12.42□□□□□ -0.42
LINC00544-201ENST00000400540 SERGEFQ9UGK8 458 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 PLA2G4CQ9UP65 541 aa12.42□□□□□ -0.42
LINC00544-201ENST00000400540 HBS1LQ9Y450 684 aaKnown RBP12.42□□□□□ -0.42
LINC00544-201ENST00000400540 TRABD2BA6NFA1 517 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 CALCAP01258 141 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 DNTTP04053 509 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 IGHV4-34P06331 123 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 CTSKP43235 329 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 RGS7P49802 495 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 CCT8P50990 548 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 CLDN6P56747 220 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 DAOAP59103 153 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 CYP4F3Q08477 520 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 CAMK2BQ13554 666 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 CUL2Q13617 745 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 TEAD4Q15561 434 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 EDRF1Q3B7T1 1238 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 SGO2Q562F6 1265 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 FAM133BQ5BKY9 247 aaKnown RBP12.41□□□□□ -0.42
LINC00544-201ENST00000400540 TCERG1LQ5VWI1 586 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 KRBA2Q6ZNG9 492 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 SIX6OS1Q8N1H7 587 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 UBR7Q8N806 425 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 CLEC4CQ8WTT0 213 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 IGSF8Q969P0 613 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 MYO19Q96H55 970 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 FAXDC2Q96IV6 333 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 LRIG1Q96JA1 1093 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 PRICKLE1Q96MT3 831 aaPredicted RBP12.41□□□□□ -0.42
LINC00544-201ENST00000400540 SLC6A18Q96N87 628 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 OSGEPQ9NPF4 335 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 ZDHHC9Q9Y397 364 aa12.41□□□□□ -0.42
LINC00544-201ENST00000400540 FAM47DPA6NHR8 397 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 CBX4O00257 560 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 O00370 1275 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 TNFSF14O43557 240 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 LATS1O95835 1130 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 IGLV3-27P01718 113 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 DLDP09622 509 aaKnown RBP12.4□□□□□ -0.42
LINC00544-201ENST00000400540 EPB41P11171 864 aaKnown RBP12.4□□□□□ -0.42
LINC00544-201ENST00000400540 CD27P26842 260 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 GRK6P43250 576 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 LRMPQ12912 555 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 SUZ12Q15022 739 aaKnown RBP12.4□□□□□ -0.42
LINC00544-201ENST00000400540 TTC31Q49AM3 519 aaPredicted RBP12.4□□□□□ -0.42
LINC00544-201ENST00000400540 PKDCCQ504Y2 493 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 PRAMEF14Q5SWL7 426 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 PIK3R6Q5UE93 754 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 ZNF776Q68DI1 518 aaPredicted RBP12.4□□□□□ -0.42
LINC00544-201ENST00000400540 NADSYN1Q6IA69 706 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 DHRS13Q6UX07 377 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 ADAT2Q7Z6V5 191 aaKnown RBP12.4□□□□□ -0.42
LINC00544-201ENST00000400540 TFAP2BQ92481 460 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 LMLNQ96KR4 655 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 ZSWIM1Q9BR11 485 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 EBF2Q9HAK2 575 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 ABCC13Q9NSE7 274 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 STIM2Q9P246 746 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 HESX1Q9UBX0 185 aa12.4□□□□□ -0.42
LINC00544-201ENST00000400540 INTS6Q9UL03 887 aaKnown RBP12.4□□□□□ -0.42
LINC00544-201ENST00000400540 URB1O60287 2271 aaKnown RBP12.4□□□□□ -0.42
LINC00544-201ENST00000400540 SETXQ7Z333 2677 aaKnown RBP12.39□□□□□ -0.43
LINC00544-201ENST00000400540 CETN3O15182 167 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 PCDHGA12O60330 932 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 STX10O60499 249 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 SIN3BO75182 1162 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 WNT1P04628 370 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 ATP5BP06576 529 aaKnown RBP12.39□□□□□ -0.43
LINC00544-201ENST00000400540 POLR2EP19388 210 aaKnown RBP12.39□□□□□ -0.43
LINC00544-201ENST00000400540 ZNF445P59923 1031 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 KRT85P78386 507 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 ZBTB16Q05516 673 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 SMAD1Q15797 465 aaKnown RBP12.39□□□□□ -0.43
LINC00544-201ENST00000400540 KIAA0895LQ68EN5 471 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 PMF1Q6P1K2 205 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 MSANTD2Q6P1R3 559 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 MMS22LQ6ZRQ5 1243 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 GATAD2AQ86YP4 633 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 DHX40Q8IX18 779 aaKnown RBP12.39□□□□□ -0.43
LINC00544-201ENST00000400540 GALNT15Q8N3T1 639 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 KCTD13Q8WZ19 329 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 MRGPRX3Q96LB0 322 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 RSPH9Q9H1X1 276 aaPredicted RBP12.39□□□□□ -0.43
LINC00544-201ENST00000400540 PABPC3Q9H361 631 aaKnown RBP12.39□□□□□ -0.43
LINC00544-201ENST00000400540 FBRSQ9HAH7 460 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 SGK2Q9HBY8 427 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 SCUBE2Q9NQ36 999 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 CNGB3Q9NQW8 809 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 DKK4Q9UBT3 224 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 COQ4Q9Y3A0 265 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 ATMQ13315 3056 aa12.39□□□□□ -0.43
LINC00544-201ENST00000400540 A0A1W2PP55 124 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 TRIM49BA6NDI0 452 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 WNT9AO14904 365 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 MID1O15344 667 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 ACSL4O60488 711 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 SETSIPP0DME0 302 aa12.38□□□□□ -0.43
LINC00544-201ENST00000400540 VDRP11473 427 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms