RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 A0A1B0GTW7 788 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 C2CD4BA6NLJ0 364 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 STRNO43815 780 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 TBC1D12O60347 775 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 DGKIO75912 1065 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 ALOX15P16050 662 aaPredicted RBP14.36□□□□□ -0.11
APOB-202ENST00000399256 GRK2P25098 689 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 CNTFP26441 200 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 TCF7P36402 384 aaPredicted RBP14.36□□□□□ -0.11
APOB-202ENST00000399256 THOP1P52888 689 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 CDKL1Q00532 357 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 GBE1Q04446 702 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 FSCBQ5H9T9 825 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 STXBP5Q5T5C0 1151 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 KLC3Q6P597 504 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 FAM183BPQ6ZVS7 135 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 AGBL3Q8NEM8 1001 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 ATXN7L3BQ96GX2 97 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 ZFRQ96KR1 1074 aaKnown RBP14.36□□□□□ -0.11
APOB-202ENST00000399256 OR52B2Q96RD2 323 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 FAM96AQ9H5X1 160 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 ACSS2Q9NR19 701 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 DCDC2Q9UHG0 476 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 RAB26Q9ULW5 256 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 UTRNP46939 3433 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 OGTO15294 1046 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 CFLARO15519 480 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 XRCC1P18887 633 aaPredicted RBP14.36□□□□□ -0.11
APOB-202ENST00000399256 PKNOX1P55347 436 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 SESN2P58004 480 aaPredicted RBP14.36□□□□□ -0.11
APOB-202ENST00000399256 ADGRE1Q14246 886 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 FLOT2Q14254 428 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 ZNF667Q5HYK9 610 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 XRRA1Q6P2D8 792 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 CMC1Q7Z7K0 106 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 NSUN6Q8TEA1 469 aaKnown RBP14.36□□□□□ -0.11
APOB-202ENST00000399256 LPAR1Q92633 364 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 USP13Q92995 863 aaPredicted RBP14.36□□□□□ -0.11
APOB-202ENST00000399256 STK39Q9UEW8 545 aa14.36□□□□□ -0.11
APOB-202ENST00000399256 CPSF3Q9UKF6 684 aaKnown RBP14.36□□□□□ -0.11
APOB-202ENST00000399256 H3BSA7 217 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 VWA5AO00534 786 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 NEMP1O14524 444 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 MSCO60682 206 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 HSPA4LO95757 839 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 GPD2P43304 727 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 HARS2P49590 506 aaKnown RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 RGS7P49802 495 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 HSP90AA5PQ58FG0 334 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 AMIGO2Q86SJ2 522 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 SNX32Q86XE0 403 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 ACMSDQ8TDX5 336 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 PRPF31Q8WWY3 499 aaKnown RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 ANKRD36BP1Q96IX9 119 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 CDRT15Q96T59 188 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 SNRNP25Q9BV90 132 aaKnown RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 MRPL4Q9BYD3 311 aaKnown RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 MAGEB5Q9BZ81 275 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 ZSCAN9O15535 394 aaPredicted RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 ACAT1P24752 427 aaKnown RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 TYK2P29597 1187 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 SLC5A2P31639 672 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 ADARP55265 1226 aaKnown RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 NIPAL4Q0D2K0 466 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 GRM1Q13255 1194 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 PDK1Q15118 436 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 STILQ15468 1287 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 CCDC14Q49A88 953 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 SNRNP48Q6IEG0 339 aaKnown RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 CES3Q6UWW8 571 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 ZPBP2Q6X784 338 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 NAPRTQ6XQN6 538 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 CDKL3Q8IVW4 592 aaPredicted RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 LILRA2Q8N149 483 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 AHI1Q8N157 1196 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 MOCOSQ96EN8 888 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 HEXIM2Q96MH2 286 aaKnown RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 CATSPER2Q96P56 530 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 PGLYRP2Q96PD5 576 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 RIMS3Q9UJD0 308 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 SIP14410 1827 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 MAGEB3O15480 346 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 FAM58BPP0C7Q3 252 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 IMPDH2P12268 514 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 CPA3P15088 417 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 TPSB2P20231 275 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 SLC10A2Q12908 348 aaPredicted RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 CYLC2Q14093 348 aaPredicted RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 PDK2Q15119 407 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 TPSAB1Q15661 275 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 SLC9A4Q6AI14 798 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 EPGNQ6UW88 154 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 ADAM32Q8TC27 787 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 ACO2Q99798 780 aaKnown RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 PKP2Q99959 881 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 CDH19Q9H159 772 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 WDR55Q9H6Y2 383 aaPredicted RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 ZNF696Q9H7X3 374 aa14.35□□□□□ -0.11
APOB-202ENST00000399256 MAFBQ9Y5Q3 323 aaPredicted RBP14.35□□□□□ -0.11
APOB-202ENST00000399256 CYP2F1P24903 491 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms