RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ANLNQ9NQW6 1124 aa19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 UXTQ9UBK9 157 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-204ENST00000397760 ANKRD65E5RJM6 399 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 CLASP2O75122 1294 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 AGTP01019 485 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 IL4RP24394 825 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 RPL21P46778 160 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 SCAPQ12770 1279 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 TTC27Q6P3X3 843 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 VSIG1Q86XK7 387 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 TDHQ8IZJ6 230 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 ZNF670Q9BS34 389 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 I6L893 689 aaPredicted RBP19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 CST8O60676 142 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 CCR1P32246 355 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 PPP3CCP48454 512 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 BRMS1LQ5PSV4 323 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 CCDC105Q8IYK2 499 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 C1orf54Q8WWF1 131 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 RNF157Q96PX1 679 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 CDK5RAP1Q96SZ6 601 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 ROPN1BQ9BZX4 212 aaPredicted RBP19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 ROPN1Q9HAT0 212 aaPredicted RBP19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 ZNF334Q9HCZ1 680 aaPredicted RBP19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 PPANQ9NQ55 473 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 MARCH2Q9P0N8 246 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 WHRNQ9P202 907 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 TLR6Q9Y2C9 796 aa19.97■□□□□ 0.79
PDLIM2-204ENST00000397760 MYO16Q9Y6X6 1858 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 CEP290O15078 2479 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 C1RP00736 705 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 DYNLT1P63172 113 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 ANKRD20A8PQ5CZ79 823 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 PPM1LQ5SGD2 360 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 HECTD3Q5T447 861 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 BBS12Q6ZW61 710 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 TRMT10CQ7L0Y3 403 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 MIB1Q86YT6 1006 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 ZNF276Q8N554 614 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 ARHGEF38Q9NXL2 777 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 R3HDM2Q9Y2K5 976 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 GBF1Q92538 1859 aa19.96■□□□□ 0.79
PDLIM2-204ENST00000397760 ZNF487B1APH4 448 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 PER2O15055 1255 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 ECEL1O95672 775 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 ATP5C1P36542 298 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 ARL4AP40617 200 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 MMP13P45452 471 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 LIG3P49916 1009 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 TBX4P57082 545 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 PPP2R5DQ14738 602 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 TAX1BP1Q86VP1 789 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 ELMOD1Q8N336 334 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 GDPD5Q8WTR4 605 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 SLC22A17Q8WUG5 538 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 FAF2Q96CS3 445 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 ACTR5Q9H9F9 607 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 MAN1C1Q9NR34 630 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 HOMER3Q9NSC5 361 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 GREB1Q4ZG55 1949 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 SLC12A8A0AV02 714 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 EPCAMP16422 314 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 CAV1Q03135 178 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 TFDP2Q14188 446 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 TRIP4Q15650 581 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 PABPC1LQ4VXU2 614 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 TNFAIP8L3Q5GJ75 292 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 RTL10Q7L3V2 364 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 RBM23Q86U06 439 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 PCDH19Q8TAB3 1148 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 GRK7Q8WTQ7 553 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 ATG4AQ8WYN0 398 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 SLC39A13Q96H72 371 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 CSPG4P5Q96PW8 444 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 DCLK3Q9C098 648 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 NACA2Q9H009 215 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 LMAN2LQ9H0V9 348 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 RCOR3Q9P2K3 495 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 DNMT3LQ9UJW3 386 aa19.95■□□□□ 0.78
PDLIM2-204ENST00000397760 CCL16O15467 120 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 CREB3O43889 395 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 F11P03951 625 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 SLC2A3P11169 496 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 GOT1P17174 413 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 ITIH2P19823 946 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 CALCOCO2Q13137 446 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 CCNG2Q16589 344 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 TMEM150AQ86TG1 271 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 SUGP1Q8IWZ8 645 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 HS6ST3Q8IZP7 471 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 CNPY4Q8N129 248 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 HAUS1Q96CS2 278 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 FCRL2Q96LA5 508 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 FAM118BQ9BPY3 351 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 CCDC134Q9H6E4 229 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 IL21Q9HBE4 155 aa19.94■□□□□ 0.78
PDLIM2-204ENST00000397760 EPOPA6NHQ4 379 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 KCNU1A8MYU2 1149 aa19.93■□□□□ 0.78
PDLIM2-204ENST00000397760 H3BRJ5 948 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms