RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CLEC11AQ9Y240 323 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 RBMX2Q9Y388 322 aaKnown RBP9.43□□□□□ -0.9
CAPN3-206ENST00000397163 RIPK3Q9Y572 518 aa9.43□□□□□ -0.9
CAPN3-206ENST00000397163 E2F8A0AVK6 867 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 F5H423 210 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 H3BNX3 289 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 CASQ2O14958 399 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 PEX1O43933 1283 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 PLIN3O60664 434 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 E2F6O75461 281 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 CSDE1O75534 798 aaKnown RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 RAD17O75943 681 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 RGS20O76081 388 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 GSRP00390 522 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 NFKBIAP25963 317 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 GRIA1P42261 906 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 ZNF143P52747 638 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 RPL26P61254 145 aaKnown RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 CD300CQ08708 224 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 PRKG1Q13976 671 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 C6orf183Q5T699 404 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 OR6B2Q6IFH4 312 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 KBTBD6Q86V97 674 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 MCUQ8NE86 351 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 NSUN6Q8TEA1 469 aaKnown RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 GIPC3Q8TF64 312 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 TMIGD2Q96BF3 282 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 LRGUKQ96M69 825 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 SGIP1Q9BQI5 828 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 CNPY3Q9BT09 278 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 EPB41L1Q9H4G0 881 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 EMCNQ9ULC0 261 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 PCDHA11Q9Y5I1 949 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 TMEM247A6NEH6 219 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 E9PBE3 544 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 TMX2-CTNND1H3BSU7 103 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 XPO1O14980 1071 aaKnown RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 TBC1D12O60347 775 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 KLHL41O60662 606 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 TRMUO75648 421 aaKnown RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 MICAL2O94851 1124 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 METTL18O95568 372 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 MYL4P12829 197 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 COX4I1P13073 169 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 HALP42357 657 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 SNAPC2Q13487 334 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 CAPSQ13938 189 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 HSP90AA5PQ58FG0 334 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 OGFRL1Q5TC84 451 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 TIFABQ6ZNK6 161 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 PATL1Q86TB9 770 aaKnown RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 UBA3Q8TBC4 463 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 ATG4CQ96DT6 458 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 DCUN1D5Q9BTE7 237 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 SENP6Q9GZR1 1112 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-206ENST00000397163 MAN1C1Q9NR34 630 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 DNAJC28Q9NX36 388 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 PSMD13Q9UNM6 376 aa9.42□□□□□ -0.9
CAPN3-206ENST00000397163 AIM2O14862 343 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 AP1G1O43747 822 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 ENDOD1O94919 500 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 GRK2P25098 689 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 CNTFP26441 200 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 ADORA2AP29274 412 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 MSX2P35548 267 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 PCLAFQ15004 111 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 TMEM132AQ24JP5 1023 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 PPP6R3Q5H9R7 873 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 FSCBQ5H9T9 825 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 ZNF667Q5HYK9 610 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 RARS2Q5T160 578 aaKnown RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 C6orf52Q5T4I8 152 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 GALNT4Q8N4A0 578 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 MARVELD2Q8N4S9 558 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 DIS3LQ8TF46 1054 aaKnown RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 CDKL2Q92772 493 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 MCRS1Q96EZ8 462 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 ANKRD36BP1Q96IX9 119 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 CDHR1Q96JP9 859 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 NLRP4Q96MN2 994 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 MRPL4Q9BYD3 311 aaKnown RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 XYLT2Q9H1B5 865 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 RNPEPQ9H4A4 650 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 TMEM134Q9H6X4 195 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 ANLNQ9NQW6 1124 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 BCLAF3A2AJT9 711 aaKnown RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 WDR27A2RRH5 827 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 OGTO15294 1046 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 ALDOAP04075 364 aaKnown RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 SRGAP2CP0DJJ0 459 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 RALBP11234 206 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 TGM2P21980 687 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 ABCE1P61221 599 aaKnown RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 CRADDP78560 199 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 PHEXP78562 749 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 PTPN11Q06124 597 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-206ENST00000397163 BSPRYQ5W0U4 402 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 ZPBP2Q6X784 338 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 PQLC3Q8N755 202 aa9.41□□□□□ -0.9
CAPN3-206ENST00000397163 AGR3Q8TD06 166 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms