RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ASH1LQ9NR48 2969 aaKnown RBP14.28□□□□□ -0.12
SEC13-205ENST00000397101 E9PAM4 449 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 CER1O95813 267 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 SKILP12757 684 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 CACNA2D1P54289 1103 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 ORC1Q13415 861 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 ARID5BQ14865 1188 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 GALNT15Q8N3T1 639 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 HNRNPLLQ8WVV9 542 aaKnown RBP14.28□□□□□ -0.12
SEC13-205ENST00000397101 TRIM44Q96DX7 344 aaPredicted RBP14.28□□□□□ -0.12
SEC13-205ENST00000397101 TMEM176AQ96HP8 235 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 HEXIM2Q96MH2 286 aaKnown RBP14.28□□□□□ -0.12
SEC13-205ENST00000397101 PANX2Q96RD6 677 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 NT5C1AQ9BXI3 368 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 ZNF518BQ9C0D4 1074 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 DEF6Q9H4E7 631 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 SEPT11Q9NVA2 429 aaKnown RBP14.28□□□□□ -0.12
SEC13-205ENST00000397101 DNAJC17Q9NVM6 304 aaKnown RBP14.28□□□□□ -0.12
SEC13-205ENST00000397101 TOR4AQ9NXH8 423 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 WSB2Q9NYS7 404 aaPredicted RBP14.28□□□□□ -0.12
SEC13-205ENST00000397101 USP36Q9P275 1121 aaKnown RBP14.28□□□□□ -0.12
SEC13-205ENST00000397101 WDR35Q9P2L0 1181 aa14.28□□□□□ -0.12
SEC13-205ENST00000397101 PRRT4C9JH25 899 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 TK2O00142 265 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 NPC1O15118 1278 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 TRIM24O15164 1050 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 FLRT2O43155 660 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 THAP12O43422 761 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 GREM1O60565 184 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 SERPING1P05155 500 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 ACO1P21399 889 aaKnown RBP14.27□□□□□ -0.13
SEC13-205ENST00000397101 WASP42768 502 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 UNC93AQ86WB7 457 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 FAM71AQ8IYT1 594 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 B3GALNT2Q8NCR0 500 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 SYN2Q92777 582 aaPredicted RBP14.27□□□□□ -0.13
SEC13-205ENST00000397101 LRIG1Q96JA1 1093 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 TNIP3Q96KP6 325 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 ACOX2Q99424 681 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 DNAJC7Q99615 494 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 BAG1Q99933 345 aaPredicted RBP14.27□□□□□ -0.13
SEC13-205ENST00000397101 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.27□□□□□ -0.13
SEC13-205ENST00000397101 B3GNT5Q9BYG0 378 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 TM7SF3Q9NS93 570 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 AIPL1Q9NZN9 384 aa14.27□□□□□ -0.13
SEC13-205ENST00000397101 URB1O60287 2271 aaKnown RBP14.27□□□□□ -0.13
SEC13-205ENST00000397101 SETXQ7Z333 2677 aaKnown RBP14.26□□□□□ -0.13
SEC13-205ENST00000397101 ATP8B3O60423 1300 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 CILPO75339 1184 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 IGLV3-19P01714 112 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 TYRP14679 529 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 TNFAIP3P21580 790 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 OXTRP30559 389 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 GNA15P30679 374 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 CLCN1P35523 988 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 MATKP42679 507 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 ENPP2Q13822 863 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 E2F5Q15329 346 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 TAF3Q5VWG9 929 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 ACOT1Q86TX2 421 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 VPS36Q86VN1 386 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 PCED1AQ9H1Q7 454 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 HAUS4Q9H6D7 363 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 CCSER2Q9H7U1 834 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 ITM2CQ9NQX7 267 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 CHORDC1Q9UHD1 332 aaPredicted RBP14.26□□□□□ -0.13
SEC13-205ENST00000397101 FBXO10Q9UK96 956 aa14.26□□□□□ -0.13
SEC13-205ENST00000397101 BZW2Q9Y6E2 419 aaKnown RBP14.26□□□□□ -0.13
SEC13-205ENST00000397101 PTPRBP23467 1997 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 HELZ2Q9BYK8 2649 aaKnown RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 MEI4A8MW99 385 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 BCAT2O15382 392 aaPredicted RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 MED7O43513 233 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 CALCAP01258 141 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 PAEPP09466 180 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 CISD3P0C7P0 127 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 MAOBP27338 520 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 DEKP35659 375 aaKnown RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 SLC5A3P53794 718 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 RAD23BP54727 409 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 INCA1Q0VD86 236 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 IFRD2Q12894 506 aaPredicted RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 CAMK2BQ13554 666 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 STARD3Q14849 445 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 SUZ12Q15022 739 aaKnown RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 SLC47A2Q86VL8 602 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 TMTC1Q8IUR5 882 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 LRRC8AQ8IWT6 810 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 UBR7Q8N806 425 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 CCDC112Q8NEF3 446 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 ADAM32Q8TC27 787 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 SETD7Q8WTS6 366 aaKnown RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 TOE1Q96GM8 510 aaKnown RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 CCDC42Q96M95 316 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 ZNF830Q96NB3 372 aaPredicted RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 UBL7Q96S82 380 aaPredicted RBP14.25□□□□□ -0.13
SEC13-205ENST00000397101 MED10Q9BTT4 135 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 BBS2Q9BXC9 721 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
SEC13-205ENST00000397101 GAREM1Q9H706 876 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms