RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 MTA1Q13330 715 aa17■□□□□ 0.31
DDR1-229ENST00000396342 NNTQ13423 1086 aa17■□□□□ 0.31
DDR1-229ENST00000396342 TPD52L1Q16890 204 aaPredicted RBP17■□□□□ 0.31
DDR1-229ENST00000396342 PIK3R6Q5UE93 754 aa17■□□□□ 0.31
DDR1-229ENST00000396342 DDX51Q8N8A6 666 aaKnown RBP eCLIP17■□□□□ 0.31
DDR1-229ENST00000396342 KDF1Q8NAX2 398 aaPredicted RBP17■□□□□ 0.31
DDR1-229ENST00000396342 OR2I1PQ8NGU4 316 aa17■□□□□ 0.31
DDR1-229ENST00000396342 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
DDR1-229ENST00000396342 LRRC72A6NJI9 287 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 BIN1O00499 593 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 THAP12O43422 761 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 DFNA5O60443 496 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 MOCS2O96007 188 aaPredicted RBP16.99■□□□□ 0.31
DDR1-229ENST00000396342 ZNF883P0CG24 379 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 CD59P13987 128 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 ABCB4P21439 1286 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 COPAP53621 1224 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 PKDCCQ504Y2 493 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 RFWD3Q6PCD5 774 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 SCUBE3Q8IX30 993 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 ATP6V0D2Q8N8Y2 350 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 FIBINQ8TAL6 211 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 TFAP2BQ92481 460 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 OMDQ99983 421 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 SRRTQ9BXP5 876 aaKnown RBP16.99■□□□□ 0.31
DDR1-229ENST00000396342 INTS2Q9H0H0 1204 aaKnown RBP16.99■□□□□ 0.31
DDR1-229ENST00000396342 UBE2TQ9NPD8 197 aaPredicted RBP16.99■□□□□ 0.31
DDR1-229ENST00000396342 CD93Q9NPY3 652 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 TM7SF3Q9NS93 570 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 KIAA1522Q9P206 1035 aaPredicted RBP16.99■□□□□ 0.31
DDR1-229ENST00000396342 TPX2Q9ULW0 747 aaKnown RBP16.99■□□□□ 0.31
DDR1-229ENST00000396342 CLEC4EQ9ULY5 219 aa16.99■□□□□ 0.31
DDR1-229ENST00000396342 MYH10P35580 1976 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 KCNJ18B7U540 433 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 FLRT2O43155 660 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 LETM1O95202 739 aaPredicted RBP16.98■□□□□ 0.31
DDR1-229ENST00000396342 MEA1Q16626 185 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 HLA-BQ31612 363 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 SLC45A4Q5BKX6 768 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 RABGAP1LQ5R372 815 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 BHLHA9Q7RTU4 235 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 ADIPOR2Q86V24 386 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 CHSY1Q86X52 802 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 CHCHD4Q8N4Q1 142 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 UBR7Q8N806 425 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 KDM1BQ8NB78 822 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 RHBDD1Q8TEB9 315 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 STK32AQ8WU08 396 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 TMEM245Q9H330 911 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 SYNCQ9H7C4 482 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 POPDC2Q9HBU9 364 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 PCDHGB2Q9Y5G2 931 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 CHD8Q9HCK8 2581 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 EML5Q05BV3 1969 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 KIAA1549LQ6ZVL6 1849 aa16.98■□□□□ 0.31
DDR1-229ENST00000396342 FAM47DPA6NHR8 397 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 F5H5T6 163 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 SRPRAP08240 638 aaKnown RBP16.97■□□□□ 0.31
DDR1-229ENST00000396342 CD27P26842 260 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 GNA15P30679 374 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 STX17P56962 302 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 RPS14P62263 151 aaKnown RBP16.97■□□□□ 0.31
DDR1-229ENST00000396342 YWHAZP63104 245 aaKnown RBP16.97■□□□□ 0.31
DDR1-229ENST00000396342 CDK17Q00537 523 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 TMEM215Q68D42 235 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 TTI2Q6NXR4 508 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 USP30Q70CQ3 517 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 BEND5Q7L4P6 421 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 DSG4Q86SJ6 1040 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 ZNF366Q8N895 744 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 DQX1Q8TE96 717 aaKnown RBP16.97■□□□□ 0.31
DDR1-229ENST00000396342 BTN2A3PQ96KV6 586 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 ACE2Q9BYF1 805 aaPredicted RBP16.97■□□□□ 0.31
DDR1-229ENST00000396342 PDCL3Q9H2J4 239 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 THAP9Q9H5L6 903 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 FAM204AQ9H8W3 233 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 PRSS16Q9NQE7 514 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.97■□□□□ 0.31
DDR1-229ENST00000396342 FBXL12Q9NXK8 326 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.97■□□□□ 0.31
DDR1-229ENST00000396342 MYO16Q9Y6X6 1858 aa16.97■□□□□ 0.31
DDR1-229ENST00000396342 EDDM13A0A1B0GTR0 161 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 GOLGA6L7A0A1B0GV03 622 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 A0A1B0GVT2 93 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 TARSL2A2RTX5 802 aaKnown RBP16.96■□□□□ 0.31
DDR1-229ENST00000396342 IGLV3-27P01718 113 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 FTH1P19P0C7X4 201 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 CD70P32970 193 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 CSKP41240 450 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 GRIA4P48058 902 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 CSNK1EP49674 416 aaKnown RBP16.96■□□□□ 0.31
DDR1-229ENST00000396342 SULT2A1Q06520 285 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 SLC12A1Q13621 1099 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 TTC39BQ5VTQ0 682 aaPredicted RBP16.96■□□□□ 0.31
DDR1-229ENST00000396342 GBP6Q6ZN66 633 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 TRIM59Q8IWR1 403 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 LGI2Q8N0V4 545 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 TTC17Q96AE7 1141 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 OSGEPQ9NPF4 335 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 KLK13Q9UKR3 277 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms