RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 UGT1A8Q9HAW9 530 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 ANLNQ9NQW6 1124 aa17.28■□□□□ 0.36
NUP50-202ENST00000396096 TIMM13Q9Y5L4 95 aaPredicted RBP17.28■□□□□ 0.36
NUP50-202ENST00000396096 PATJQ8NI35 1801 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 MYO18AQ92614 2054 aaKnown RBP17.27■□□□□ 0.36
NUP50-202ENST00000396096 TDRD15B5MCY1 1934 aaKnown RBP17.27■□□□□ 0.36
NUP50-202ENST00000396096 WDR27A2RRH5 827 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 FAM72CH0Y354 149 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 I6L893 689 aaPredicted RBP17.27■□□□□ 0.36
NUP50-202ENST00000396096 ATP6V1G2O95670 118 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 PGK1P00558 417 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 USP17L7P0C7H9 530 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 ODC1P11926 461 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 PGAM1P18669 254 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 ARL13BQ3SXY8 428 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 SWT1Q5T5J6 900 aaKnown RBP17.27■□□□□ 0.36
NUP50-202ENST00000396096 FAM72AQ5TYM5 149 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 PM20D1Q6GTS8 502 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 FAM72DQ6L9T8 149 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 ZNF449Q6P9G9 518 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 CDHR3Q6ZTQ4 885 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 NLRP9Q7RTR0 991 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 FAM72BQ86X60 149 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 ARNTL2Q8WYA1 636 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 TRIB2Q92519 343 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 ACBD6Q9BR61 282 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 TRIM56Q9BRZ2 755 aaKnown RBP17.27■□□□□ 0.36
NUP50-202ENST00000396096 TRIM55Q9BYV6 548 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 NPHS2Q9NP85 383 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 KANSL3Q9P2N6 904 aa17.27■□□□□ 0.36
NUP50-202ENST00000396096 CASTOR2A6NHX0 329 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 NCAM1P13591 858 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 PSMB4P28070 264 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 CRHR1P34998 444 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 CXCR3P49682 368 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 MNAT1P51948 309 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 TPI1P60174 286 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 PPIDQ08752 370 aaKnown RBP17.27■□□□□ 0.35
NUP50-202ENST00000396096 PLEKHG4Q58EX7 1191 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 CCNYQ8ND76 341 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 DEPDC1BQ8WUY9 529 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 MYLPFQ96A32 169 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 PKMYT1Q99640 499 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 LRMDAQ9H2I8 198 aa17.27■□□□□ 0.35
NUP50-202ENST00000396096 PTPRDP23468 1912 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 SEPT4O43236 478 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 ADAMTS4O75173 837 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 RABGGTBP53611 331 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 SREBF2Q12772 1141 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 IFRD2Q12894 506 aaPredicted RBP17.26■□□□□ 0.35
NUP50-202ENST00000396096 BMPR2Q13873 1038 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 STXBP5Q5T5C0 1151 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 CD300LGQ6UXG3 332 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 BEND5Q7L4P6 421 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 RAB3IL1Q8TBN0 382 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 ACMSDQ8TDX5 336 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 INPP5DQ92835 1189 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 PAAF1Q9BRP4 392 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 COLEC11Q9BWP8 271 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 DDIT4Q9NX09 232 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 PADI3Q9ULW8 664 aa17.26■□□□□ 0.35
NUP50-202ENST00000396096 M0QZQ0 153 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 MTSS1O43312 755 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 MGEA5O60502 916 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 AMHP03971 560 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 KRT16P08779 473 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 BGNP21810 368 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 PTPN3P26045 913 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 MGAT1P26572 445 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 DBN1Q16643 649 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 METTL23Q86XA0 190 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 RFWD2Q8NHY2 731 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 ADAM32Q8TC27 787 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 TMEM237Q96Q45 408 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 NOD2Q9HC29 1040 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 ALG13Q9NP73 1137 aaKnown RBP17.25■□□□□ 0.35
NUP50-202ENST00000396096 SAR1AQ9NR31 198 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 SIRPGQ9P1W8 387 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 DSEQ9UL01 958 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 NLRC5Q86WI3 1866 aa17.25■□□□□ 0.35
NUP50-202ENST00000396096 A0A0U1RQF3 1178 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 FAM155AB1AL88 458 aaPredicted RBP17.24■□□□□ 0.35
NUP50-202ENST00000396096 T-ENOLP0DO92 83 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 CD52P31358 61 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 FCGRTP55899 365 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 GALNT2Q10471 571 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 GRIK3Q13003 919 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 FRG1Q14331 258 aaKnown RBP17.24■□□□□ 0.35
NUP50-202ENST00000396096 CRYMQ14894 314 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 TP53INP2Q8IXH6 220 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 NETO2Q8NC67 525 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 CDKL2Q92772 493 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 HDAC11Q96DB2 347 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 UROC1Q96N76 676 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 GORASP1Q9BQQ3 440 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 SEPT10Q9P0V9 454 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 TRIM33Q9UPN9 1127 aa17.24■□□□□ 0.35
NUP50-202ENST00000396096 MTO1Q9Y2Z2 717 aaKnown RBP17.24■□□□□ 0.35
NUP50-202ENST00000396096 ERI2A8K979 691 aaKnown RBP17.24■□□□□ 0.35
NUP50-202ENST00000396096 TRAFD1O14545 582 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms