RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 DYNC1LI2O43237 492 aaPredicted RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 ASLP04424 464 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 SPATA31D3P0C874 917 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 KRT3P12035 628 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 DESP17661 470 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 MATKP42679 507 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 SCNN1GP51170 649 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 ARID5AQ03989 594 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 DPYSQ14117 519 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 PRKD1Q15139 912 aaPredicted RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 LONRF1Q17RB8 773 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 CCDC14Q49A88 953 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 PLEKHG4Q58EX7 1191 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 TTC39BQ5VTQ0 682 aaPredicted RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 STEAP4Q687X5 459 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 SCARA3Q6AZY7 606 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 CCDC137Q6PK04 289 aaKnown RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 AGMOQ6ZNB7 445 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 SPATA31D4Q6ZUB0 917 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 GALNT7Q86SF2 657 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 ZC3H18Q86VM9 953 aaKnown RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 KBTBD2Q8IY47 623 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 C7orf31Q8N865 590 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 NAT8LQ8N9F0 302 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 GDAP1Q8TB36 358 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 C10orf82Q8WW14 230 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 TADA1Q96BN2 335 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 C8orf48Q96LL4 319 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 C1orf74Q96LT6 269 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 ZNF184Q99676 751 aaPredicted RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 RC3H2Q9HBD1 1191 aaKnown RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 SAR1AQ9NR31 198 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 KRT82Q9NSB4 513 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 ZNF212Q9UDV6 495 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 POLIQ9UNA4 740 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 CDY2AQ9Y6F7 541 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 MYADML2A6NDP7 307 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 TMEM110-MUSTN1A8MSY1 372 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 SPTLC1O15269 473 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 NCAM2O15394 837 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 TBX10O75333 385 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 SUPT3HO75486 399 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 TMCC1O94876 653 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 GAS8O95995 478 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 IGLV3-27P01718 113 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 PABPC4LP0CB38 370 aaKnown RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 KRT5P13647 590 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 STX2P32856 288 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 MARCKSL1P49006 195 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 USP46P62068 366 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 SULT2A1Q06520 285 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 TUSC3Q13454 348 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 TFDP2Q14188 446 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 RCN1Q15293 331 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 ACSBG2Q5FVE4 666 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 PPP1R26Q5T8A7 1209 aaPredicted RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 RFWD3Q6PCD5 774 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 C14orf80Q86SX3 495 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 DNAAF5Q86Y56 855 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 CPA5Q8WXQ8 436 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 HERPUD2Q9BSE4 406 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 MLXIPLQ9NP71 852 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 OSER1Q9NX31 292 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 MTMR10Q9NXD2 777 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 ZNF180Q9UJW8 692 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 FZD10Q9ULW2 581 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 TNFRSF10BO14763 440 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 PAPSS1O43252 624 aaPredicted RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 ATP9BO43861 1147 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 PSMG1O95456 288 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 GJB1P08034 283 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 ZDHHC11BP0C7U3 371 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 BRAFP15056 766 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 NOS2P35228 1153 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 ACLYP53396 1101 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 TFAMQ00059 246 aaKnown RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 SOX4Q06945 474 aaPredicted RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 DPYSL3Q14195 570 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 KCNJ11Q14654 390 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 GPNMBQ14956 572 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 ZRSR2Q15696 482 aaKnown RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 RASIP1Q5U651 963 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 KLHDC10Q6PID8 442 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 DSTYKQ6XUX3 929 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 PPP1R21Q6ZMI0 780 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 CATSPER4Q7RTX7 472 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 FAM126BQ8IXS8 530 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 ANKRD42Q8N9B4 389 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 DNAJB3Q8WWF6 145 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 CPB2Q96IY4 423 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 QKIQ96PU8 341 aaKnown RBP eCLIP5.53□□□□□ -1.524e-14■■■■■ 30.6
VPS41-203ENST00000395969 ARPC5LQ9BPX5 153 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 DDX50Q9BQ39 737 aaKnown RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 MRPL45Q9BRJ2 306 aaKnown RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 MCMBPQ9BTE3 642 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 TTLL2Q9BWV7 592 aa5.53□□□□□ -1.52
VPS41-203ENST00000395969 CADM1Q9BY67 442 aaKnown RBP5.53□□□□□ -1.52
VPS41-203ENST00000395969 CDC42EP4Q9H3Q1 356 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms