RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 SART1O43290 800 aaKnown RBP16.78■□□□□ 0.28
CXCL12-206ENST00000395795 TRUB2O95900 331 aaKnown RBP16.78■□□□□ 0.28
CXCL12-206ENST00000395795 EPHX1P07099 455 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 DLDP09622 509 aaKnown RBP16.78■□□□□ 0.28
CXCL12-206ENST00000395795 MAOBP27338 520 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 DPP6P42658 865 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 SLC11A2P49281 568 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 YWHAZP63104 245 aaKnown RBP16.78■□□□□ 0.28
CXCL12-206ENST00000395795 BNC1Q01954 994 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 SEMA3BQ13214 749 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 MAN2A1Q16706 1144 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 DCAF6Q58WW2 860 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 ZC3H12AQ5D1E8 599 aaKnown RBP16.78■□□□□ 0.28
CXCL12-206ENST00000395795 ARTNQ5T4W7 220 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 SMYD5Q6GMV2 418 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 SERPINA13PQ6UXR4 307 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 MMS22LQ6ZRQ5 1243 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 SLC47A2Q86VL8 602 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 FAM71AQ8IYT1 594 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 AHI1Q8N157 1196 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 CFAP52Q8N1V2 620 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 OR2T3Q8NH03 318 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 FAM149B1Q96BN6 582 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 SIPA1Q96FS4 1042 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 NUSAP1Q9BXS6 441 aaKnown RBP16.78■□□□□ 0.28
CXCL12-206ENST00000395795 LHX5Q9H2C1 402 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 LMBRD1Q9NUN5 540 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 DNAJC12Q9UKB3 198 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 CHD8Q9HCK8 2581 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 MED7O43513 233 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 ERBB2P04626 1255 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 ERCC5P28715 1186 aaPredicted RBP16.77■□□□□ 0.28
CXCL12-206ENST00000395795 MAPK8P45983 427 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 NOVA1P51513 510 aaKnown RBP16.77■□□□□ 0.28
CXCL12-206ENST00000395795 RPS14P62263 151 aaKnown RBP16.77■□□□□ 0.28
CXCL12-206ENST00000395795 PTPN20Q4JDL3 420 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 DAB2IPQ5VWQ8 1189 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 OLFML1Q6UWY5 402 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 PASD1Q8IV76 773 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 HJURPQ8NCD3 748 aaPredicted RBP16.77■□□□□ 0.28
CXCL12-206ENST00000395795 CEP76Q8TAP6 659 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 FAM81BQ96LP2 452 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 GPR174Q9BXC1 333 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 NAA15Q9BXJ9 866 aaKnown RBP16.77■□□□□ 0.28
CXCL12-206ENST00000395795 NDST4Q9H3R1 872 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 POPDC2Q9HBU9 364 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 SAMSN1Q9NSI8 373 aaKnown RBP16.77■□□□□ 0.28
CXCL12-206ENST00000395795 STIM2Q9P246 746 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 NFE2L3Q9Y4A8 694 aa16.77■□□□□ 0.28
CXCL12-206ENST00000395795 MAP1BP46821 2468 aaKnown RBP16.77■□□□□ 0.27
CXCL12-206ENST00000395795 METTL12A8MUP2 240 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 UPK3BL1B0FP48 263 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 UPK3BL2E5RIL1 263 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 I6L893 689 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-206ENST00000395795 ARHGAP33O14559 1287 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 SYNCRIPO60506 623 aaKnown RBP16.76■□□□□ 0.27
CXCL12-206ENST00000395795 CFIP05156 583 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 CD59P13987 128 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 CTSOP43234 321 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-206ENST00000395795 MTIF2P46199 727 aaKnown RBP16.76■□□□□ 0.27
CXCL12-206ENST00000395795 VWA3BQ502W6 1294 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 HSP90AA4PQ58FG1 418 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 CACUL1Q86Y37 369 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 CREBRFQ8IUR6 639 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 MFN1Q8IWA4 741 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 DEFB106AQ8N104 65 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 C1orf131Q8NDD1 294 aaKnown RBP16.76■□□□□ 0.27
CXCL12-206ENST00000395795 DEFB124Q8NES8 71 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 CADM4Q8NFZ8 388 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 PRCCQ92733 491 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-206ENST00000395795 GOLGA1Q92805 767 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 ORAI3Q9BRQ5 295 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 ASNSD1Q9NWL6 643 aa16.76■□□□□ 0.27
CXCL12-206ENST00000395795 ZBTB24O43167 697 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-206ENST00000395795 TOP3BO95985 862 aaKnown RBP16.75■□□□□ 0.27
CXCL12-206ENST00000395795 MOCS2O96007 188 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-206ENST00000395795 CEACAM1P13688 526 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 TACR2P21452 398 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 KCNA4P22459 653 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 ACSL1P33121 698 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 CDH5P33151 784 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-206ENST00000395795 USP8P40818 1118 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 CSKP41240 450 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 IRAK1P51617 712 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 ARID5BQ14865 1188 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 UAP1L1Q3KQV9 507 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 FNDC3BQ53EP0 1204 aaKnown RBP16.75■□□□□ 0.27
CXCL12-206ENST00000395795 RAP1GAP2Q684P5 730 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 FAM183BPQ6ZVS7 135 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 APCDD1Q8J025 514 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 FOXJ1Q92949 421 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 PPP1R13BQ96KQ4 1090 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 TUBGCP2Q9BSJ2 902 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 PLCB1Q9NQ66 1216 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 ANLNQ9NQW6 1124 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 DNAAF2Q9NVR5 837 aaKnown RBP16.75■□□□□ 0.27
CXCL12-206ENST00000395795 FHOD1Q9Y613 1164 aa16.75■□□□□ 0.27
CXCL12-206ENST00000395795 KMT2BQ9UMN6 2715 aaPredicted RBP16.74■□□□□ 0.27
CXCL12-206ENST00000395795 NDUFS2O75306 463 aa16.74■□□□□ 0.27
CXCL12-206ENST00000395795 GRAP2O75791 330 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms