RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 GPR20Q99678 358 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 IARS2Q9NSE4 1012 aaKnown RBP13.57□□□□□ -0.24
NFKB1-202ENST00000394820 CCDC167Q9P0B6 97 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 APOC4-APOC2K7ER74 178 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 RNASEH1O60930 286 aaKnown RBP13.57□□□□□ -0.24
NFKB1-202ENST00000394820 APOC2P02655 101 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 CCR10P46092 362 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 ESRRGP62508 458 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 GRM1Q13255 1194 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 TTLL4Q14679 1199 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 ADGRD1Q6QNK2 874 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 UNC5AQ6ZN44 842 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 C15orf39Q6ZRI6 1047 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 SNX25Q9H3E2 840 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 LNPEPQ9UIQ6 1025 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 PAPSS1O43252 624 aaPredicted RBP13.57□□□□□ -0.24
NFKB1-202ENST00000394820 TYROBPO43914 113 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 ABHD2P08910 425 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 VCLP18206 1134 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 ADCYAP1R1P41586 468 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 SFT2D3Q587I9 215 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 SPNS2Q8IVW8 549 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 PYROXD2Q8N2H3 581 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 GALNT15Q8N3T1 639 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 BHLHE22Q8NFJ8 381 aaPredicted RBP13.57□□□□□ -0.24
NFKB1-202ENST00000394820 THAP11Q96EK4 314 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 UBE2OQ9C0C9 1292 aaKnown RBP13.57□□□□□ -0.24
NFKB1-202ENST00000394820 PREBQ9HCU5 417 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 ZNF112Q9UJU3 913 aa13.57□□□□□ -0.24
NFKB1-202ENST00000394820 DOCK5Q9H7D0 1870 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 DFFAO00273 331 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 PARNO95453 639 aaKnown RBP13.56□□□□□ -0.24
NFKB1-202ENST00000394820 MT-ND1P03886 318 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 ITGAVP06756 1048 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 GNAZP19086 355 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 TGM2P21980 687 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 ACAT1P24752 427 aaKnown RBP13.56□□□□□ -0.24
NFKB1-202ENST00000394820 CA9Q16790 459 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 ARHGAP18Q8N392 663 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 PARP8Q8N3A8 854 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 PHTF2Q8N3S3 785 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 PIWIL1Q96J94 861 aaKnown RBP13.56□□□□□ -0.24
NFKB1-202ENST00000394820 KCNK16Q96T55 309 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 SMARCAD1Q9H4L7 1026 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 THAP1Q9NVV9 213 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 WDR35Q9P2L0 1181 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 NUMBLQ9Y6R0 609 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 RARBP10826 455 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 VAV1P15498 845 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 ALDH1A3P47895 512 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 FUT11Q495W5 492 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 PPM1LQ5SGD2 360 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 CELF3Q5SZQ8 465 aaKnown RBP13.56□□□□□ -0.24
NFKB1-202ENST00000394820 C16orf87Q6PH81 154 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 KIAA0319LQ8IZA0 1049 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 SIX6OS1Q8N1H7 587 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 TDRD5Q8NAT2 981 aaKnown RBP13.56□□□□□ -0.24
NFKB1-202ENST00000394820 DCAKDQ8WVC6 231 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 SLC10A4Q96EP9 437 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 TCF7L2Q9NQB0 619 aa13.56□□□□□ -0.24
NFKB1-202ENST00000394820 PMPCBO75439 489 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 FESP07332 822 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 FBXO48Q5FWF7 155 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 PITRM1Q5JRX3 1037 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 BBS12Q6ZW61 710 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 PHF13Q86YI8 300 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 RNF168Q8IYW5 571 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 IPMKQ8NFU5 416 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 OR52K1Q8NGK4 314 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 SLC44A1Q8WWI5 657 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 RCN3Q96D15 328 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 KCNK4Q9NYG8 393 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 PLLPQ9Y342 182 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 C15orf38-AP3S2A0A0A6YYH1 394 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 MCF2P10911 925 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 GCAP28676 217 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 YWHAZP63104 245 aaKnown RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 KLF1Q13351 362 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 ATP1A4Q13733 1029 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 DGKDQ16760 1214 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 CDCA2Q69YH5 1023 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 CATSPER4Q7RTX7 472 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 ARPINQ7Z6K5 226 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 CDKL3Q8IVW4 592 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 PNPLA1Q8N8W4 532 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 DENND1AQ8TEH3 1009 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 C12orf42Q96LP6 360 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 NPAS2Q99743 824 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 TMPRSS4Q9NRS4 437 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 HBS1LQ9Y450 684 aaKnown RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 E7ENQ6 273 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 ACKR2O00590 384 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 PMM2O15305 246 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 TM7SF2O76062 418 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 SULT1E1P49888 294 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 CSE1LP55060 971 aaKnown RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 PPIDQ08752 370 aaKnown RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 CCDC15Q0P6D6 951 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 RALGDSQ12967 914 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms