RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 C10orf142B7Z368 130 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 E7ENQ6 273 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 IGLV3-27P01718 113 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 CD70P32970 193 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 GUF1Q8N442 669 aaKnown RBP16.01■□□□□ 0.15
CHMP3-202ENST00000393773 PDCD7Q8N8D1 485 aaKnown RBP16.01■□□□□ 0.15
CHMP3-202ENST00000393773 FBXL13Q8NEE6 735 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 EDEM1Q92611 657 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 LMLNQ96KR4 655 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 PRICKLE1Q96MT3 831 aaPredicted RBP16.01■□□□□ 0.15
CHMP3-202ENST00000393773 RSPH9Q9H1X1 276 aaPredicted RBP16.01■□□□□ 0.15
CHMP3-202ENST00000393773 PABPC3Q9H361 631 aaKnown RBP16.01■□□□□ 0.15
CHMP3-202ENST00000393773 FTSJ1Q9UET6 329 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 SERGEFQ9UGK8 458 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 USP25Q9UHP3 1055 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 FLNBO75369 2602 aaKnown RBP16.01■□□□□ 0.15
CHMP3-202ENST00000393773 MGAQ8IWI9 3026 aa16.01■□□□□ 0.15
CHMP3-202ENST00000393773 A0A1B0GTQ1 180 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 E9PAM4 449 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 VILLO15195 856 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 SLC6A4P31645 630 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 SLC8A3P57103 927 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 BST2Q10589 180 aaKnown RBP16■□□□□ 0.15
CHMP3-202ENST00000393773 DPYDQ12882 1025 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 INAVAQ3KP66 663 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 FAM133BQ5BKY9 247 aaKnown RBP16■□□□□ 0.15
CHMP3-202ENST00000393773 BSPRYQ5W0U4 402 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 KIAA0895LQ68EN5 471 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 MSANTD2Q6P1R3 559 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 USP30Q70CQ3 517 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 GOLGA1Q92805 767 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 TMA16Q96EY4 203 aaKnown RBP16■□□□□ 0.15
CHMP3-202ENST00000393773 SLC6A18Q96N87 628 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 MTG2Q9H4K7 406 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 RAB20Q9NX57 234 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 CFAP45Q9UL16 551 aa16■□□□□ 0.15
CHMP3-202ENST00000393773 CMA1P23946 247 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 RPL13P26373 211 aaKnown RBP15.99■□□□□ 0.15
CHMP3-202ENST00000393773 DAOAP59103 153 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 RACK1P63244 317 aaKnown RBP15.99■□□□□ 0.15
CHMP3-202ENST00000393773 ADAM9Q13443 819 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 SHBQ15464 509 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 EDRF1Q3B7T1 1238 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 CBWD6Q4V339 395 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 CCDC157Q569K6 752 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 CBWD3Q5JTY5 395 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 CBWD5Q5RIA9 395 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 MPP7Q5T2T1 576 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 PIK3R6Q5UE93 754 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 RFWD3Q6PCD5 774 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 ADAT2Q7Z6V5 191 aaKnown RBP15.99■□□□□ 0.15
CHMP3-202ENST00000393773 SCML4Q8N228 414 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 UBR7Q8N806 425 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 ENGASEQ8NFI3 743 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 RNF139Q8WU17 664 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 NXPE2Q96DL1 559 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 IPO9Q96P70 1041 aaKnown RBP15.99■□□□□ 0.15
CHMP3-202ENST00000393773 ACE2Q9BYF1 805 aaPredicted RBP15.99■□□□□ 0.15
CHMP3-202ENST00000393773 EBF2Q9HAK2 575 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 LRRC4Q9HBW1 653 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 SCML1Q9UN30 329 aa15.99■□□□□ 0.15
CHMP3-202ENST00000393773 FAM237AA0A1B0GTK4 181 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 A0A1W2PPC4 97 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 CBX4O00257 560 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 O00370 1275 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 PLK4O00444 970 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 DFNA5O60443 496 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 TBL1XO60907 577 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 WNT1P04628 370 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 ATP5BP06576 529 aaKnown RBP15.98■□□□□ 0.15
CHMP3-202ENST00000393773 ABCG1P45844 678 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 CLDN6P56747 220 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 CUL2Q13617 745 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 PKDCCQ504Y2 493 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 SGO2Q562F6 1265 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 TMPRSS12Q86WS5 348 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 GATAD2AQ86YP4 633 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 SIX6OS1Q8N1H7 587 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 ADAM32Q8TC27 787 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 KCTD13Q8WZ19 329 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 SNX21Q969T3 373 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 EEF2KMTQ96G04 330 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 MRGPRX3Q96LB0 322 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 ELF4Q99607 663 aaPredicted RBP15.98■□□□□ 0.15
CHMP3-202ENST00000393773 IRX2Q9BZI1 471 aaPredicted RBP15.98■□□□□ 0.15
CHMP3-202ENST00000393773 CNGB3Q9NQW8 809 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 ABCC13Q9NSE7 274 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 INTS6Q9UL03 887 aaKnown RBP15.98■□□□□ 0.15
CHMP3-202ENST00000393773 PCDHGA1Q9Y5H4 931 aa15.98■□□□□ 0.15
CHMP3-202ENST00000393773 GOLGA6L7A0A1B0GV03 622 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 ENC1O14682 589 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 MID1O15344 667 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 SIN3BO75182 1162 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 GABBR2O75899 941 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 SETSIPP0DME0 302 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 POLR2EP19388 210 aaKnown RBP15.97■□□□□ 0.15
CHMP3-202ENST00000393773 ACADVLP49748 655 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 GALCP54803 685 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 C21orf59P57076 290 aa15.97■□□□□ 0.15
CHMP3-202ENST00000393773 KCNJ12Q14500 433 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms