RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 KCNV2Q8TDN2 545 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 ACDQ96AP0 544 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 ZNF653Q96CK0 615 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 MCEEQ96PE7 176 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 SIK2Q9H0K1 926 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 DEF6Q9H4E7 631 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 CLEC4EQ9ULY5 219 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 STARD13Q9Y3M8 1113 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 HS3ST4Q9Y661 456 aa19.66■□□□□ 0.74
PDLIM7-204ENST00000393546 KIAA1549LQ6ZVL6 1849 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 TIE1P35590 1138 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 ZNF143P52747 638 aaPredicted RBP19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 RPL7AP62424 266 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 RPS24P62847 133 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 SATB1Q01826 763 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 ARL13BQ3SXY8 428 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 HSF5Q4G112 596 aaPredicted RBP19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 RABGAP1LQ5R372 815 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 EMC10Q5UCC4 262 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 PKN3Q6P5Z2 889 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 FAM131BQ86XD5 332 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 CFAP52Q8N1V2 620 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 CENPIQ92674 756 aaPredicted RBP19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 MYEOVQ96EZ4 313 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 PRICKLE1Q96MT3 831 aaPredicted RBP19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 PRMT1Q99873 361 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 CNPY3Q9BT09 278 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 MRPL47Q9HD33 250 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 PRMT8Q9NR22 394 aaPredicted RBP19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 SLC8A2Q9UPR5 921 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 SCINQ9Y6U3 715 aa19.65■□□□□ 0.74
PDLIM7-204ENST00000393546 SSU72P8A0A1W2PR75 194 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 PRRT4C9JH25 899 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 ATMINO43313 823 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 KIR2DL1P43626 348 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 MAPK8IP2Q13387 824 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 AUHQ13825 339 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 ZNF528Q3MIS6 628 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 SH3PXD2AQ5TCZ1 1133 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 TTC39BQ5VTQ0 682 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 RNF43Q68DV7 783 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 FBXL22Q6P050 247 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 SYT13Q7L8C5 426 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 TRMT11Q7Z4G4 463 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 ANKS1BQ7Z6G8 1248 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 MFN1Q8IWA4 741 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 CARNMT1Q8N4J0 409 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 FIBINQ8TAL6 211 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 FAM172AQ8WUF8 416 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 ATOH1Q92858 354 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 C1orf74Q96LT6 269 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 HAPLN3Q96S86 360 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 MYO1AQ9UBC5 1043 aa19.64■□□□□ 0.73
PDLIM7-204ENST00000393546 MYO18AQ92614 2054 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 H0Y626 953 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 TIMM44O43615 452 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 PAPSS2O95340 614 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 SP9P0CG40 484 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 NRLP54845 237 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 E2F5Q15329 346 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 SLC18A3Q16572 532 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 GEN1Q17RS7 908 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 LRRC31Q6UY01 552 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 CCDC33Q8N5R6 958 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 ZNF513Q8N8E2 541 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 WFIKKN2Q8TEU8 576 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 UCMAQ8WVF2 138 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 CCDC42Q96M95 316 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 RPRD1AQ96P16 312 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 CHP1Q99653 195 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 ANLNQ9NQW6 1124 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 VANGL2Q9ULK5 521 aa19.63■□□□□ 0.73
PDLIM7-204ENST00000393546 ANTXRLA6NF34 631 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 TMEM191CA6NGB0 347 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 CCP110O43303 1012 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 AKR1B10O60218 316 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 KLF8O95600 359 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 HLA-FP30511 346 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 ADRA1BP35368 520 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 HDAC4P56524 1084 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 GFPT1Q06210 699 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 CDH18Q13634 790 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 DMC1Q14565 340 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 EIF4HQ15056 248 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 ASTE1Q2TB18 679 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 RAB6CQ53S08 254 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 EOGTQ5NDL2 527 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 SDE2Q6IQ49 451 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 TSSK4Q6SA08 328 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 C14orf80Q86SX3 495 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 ALLCQ8N6M5 410 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 IL17RCQ8NAC3 791 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 TXNDC5Q8NBS9 432 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 FAM126AQ9BYI3 521 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 RAB6CQ9H0N0 254 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 NHEJ1Q9H9Q4 299 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 ABCB8Q9NUT2 735 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 C2orf42Q9NWW7 574 aa19.62■□□□□ 0.73
PDLIM7-204ENST00000393546 ELOVL2Q9NXB9 296 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms