RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 USP41Q3LFD5 358 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 ANKRD20A2Q5SQ80 823 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 ANKRD20A1Q5TYW2 823 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 ANKRD20A3Q5VUR7 823 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 KIAA1841Q6NSI8 718 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 PDZD4Q76G19 769 aaPredicted RBP18.2■□□□□ 0.5
SHTN1-203ENST00000392901 NLRP14Q86W24 1093 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 NPWQ8N729 165 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 GIPC2Q8TF65 315 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 FBXO32Q969P5 355 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 TOP1MTQ969P6 601 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 IGSF21Q96ID5 467 aa18.2■□□□□ 0.5
SHTN1-203ENST00000392901 MYO16Q9Y6X6 1858 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 E7ESA3 106 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 PAGE1O75459 146 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 SSTR1P30872 391 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 DEFB103AP81534 67 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 PRKD1Q15139 912 aaPredicted RBP18.19■□□□□ 0.5
SHTN1-203ENST00000392901 BRMS1LQ5PSV4 323 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 PALM2Q8IXS6 379 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 CCT8L2Q96SF2 557 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 VN1R3Q9BXE9 311 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 OSBPL2Q9H1P3 480 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 EURLQ9NYK6 297 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 COL4A4P53420 1690 aaPredicted RBP18.19■□□□□ 0.5
SHTN1-203ENST00000392901 CLUHO75153 1309 aa18.19■□□□□ 0.5
SHTN1-203ENST00000392901 EXOC1LA0A1B0GW35 172 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 WDR27A2RRH5 827 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 HAPLN1P10915 354 aaPredicted RBP18.18■□□□□ 0.5
SHTN1-203ENST00000392901 OR1D2P34982 312 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 TAF10Q12962 218 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 C4orf22Q6V702 233 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 SERPINB11Q96P15 392 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 FERMT1Q9BQL6 677 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 FAM107BQ9H098 131 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 CHMP2BQ9UQN3 213 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 MRPL42Q9Y6G3 142 aaKnown RBP18.18■□□□□ 0.5
SHTN1-203ENST00000392901 KIAA0100Q14667 2235 aaKnown RBP18.18■□□□□ 0.5
SHTN1-203ENST00000392901 A0A0A0MRY4 1105 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 TRIM43BA6NCK2 446 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 POC1B-GALNT4F8VUJ3 575 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 KCNK1O00180 336 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 RNF103O00237 685 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 TBX18O95935 607 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 GLUD2P49448 558 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 SMARCB1Q12824 385 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 PSMD5Q16401 504 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 PPP1R21Q6ZMI0 780 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 C3orf62Q6ZUJ4 267 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 TAOK1Q7L7X3 1001 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 ARHGAP18Q8N392 663 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 COLGALT1Q8NBJ5 622 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 DEPDC1BQ8WUY9 529 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 TRIM43Q96BQ3 446 aaPredicted RBP18.18■□□□□ 0.5
SHTN1-203ENST00000392901 ARMC5Q96C12 935 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 MRRFQ96E11 262 aaKnown RBP18.18■□□□□ 0.5
SHTN1-203ENST00000392901 FCRL2Q96LA5 508 aaPredicted RBP18.18■□□□□ 0.5
SHTN1-203ENST00000392901 SPATA13Q96N96 652 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 HAPLN3Q96S86 360 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 PHACTR1Q9C0D0 580 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 IL37Q9NZH6 218 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 LGALS13Q9UHV8 139 aa18.18■□□□□ 0.5
SHTN1-203ENST00000392901 ZMYND8Q9ULU4 1186 aaPredicted RBP18.18■□□□□ 0.5
SHTN1-203ENST00000392901 MAGED2Q9UNF1 606 aaPredicted RBP18.18■□□□□ 0.5
SHTN1-203ENST00000392901 ABHD14A-ACY1A0A1B0GW23 586 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 GMNCA6NCL1 334 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 CDH16O75309 829 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 STK10O94804 968 aaKnown RBP18.17■□□□□ 0.5
SHTN1-203ENST00000392901 RTN3O95197 1032 aaPredicted RBP18.17■□□□□ 0.5
SHTN1-203ENST00000392901 ACRP10323 421 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 RFC2P35250 354 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 ELK3P41970 407 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 ZNF135P52742 658 aaPredicted RBP18.17■□□□□ 0.5
SHTN1-203ENST00000392901 EFEMP1Q12805 493 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 IGDCC3Q8IVU1 814 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 ATP11CQ8NB49 1132 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 ZNF473Q8WTR7 871 aaKnown RBP18.17■□□□□ 0.5
SHTN1-203ENST00000392901 ATXN2LQ8WWM7 1075 aaKnown RBP18.17■□□□□ 0.5
SHTN1-203ENST00000392901 CELF6Q96J87 481 aaKnown RBP18.17■□□□□ 0.5
SHTN1-203ENST00000392901 XPO6Q96QU8 1125 aaKnown RBP18.17■□□□□ 0.5
SHTN1-203ENST00000392901 TIMP1P01033 207 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 RAG1P15918 1043 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 PPP2R5DQ14738 602 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 RASIP1Q5U651 963 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 ANKLE1Q8NAG6 615 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 CENPTQ96BT3 561 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 OXCT2Q9BYC2 517 aaPredicted RBP18.17■□□□□ 0.5
SHTN1-203ENST00000392901 MTRRQ9UBK8 725 aa18.17■□□□□ 0.5
SHTN1-203ENST00000392901 FAM92AA1XBS5 289 aa18.16■□□□□ 0.5
SHTN1-203ENST00000392901 PIAS1O75925 651 aa18.16■□□□□ 0.5
SHTN1-203ENST00000392901 SERPINB6P35237 376 aa18.16■□□□□ 0.5
SHTN1-203ENST00000392901 RPL10AP62906 217 aaKnown RBP18.16■□□□□ 0.5
SHTN1-203ENST00000392901 WASHC5Q12768 1159 aa18.16■□□□□ 0.5
SHTN1-203ENST00000392901 TMED2Q15363 201 aa18.16■□□□□ 0.5
SHTN1-203ENST00000392901 SLC8B1Q6J4K2 584 aa18.16■□□□□ 0.5
SHTN1-203ENST00000392901 MIB1Q86YT6 1006 aa18.16■□□□□ 0.5
SHTN1-203ENST00000392901 MAML1Q92585 1016 aa18.16■□□□□ 0.5
SHTN1-203ENST00000392901 SPATA17Q96L03 361 aa18.16■□□□□ 0.5
SHTN1-203ENST00000392901 TLR8Q9NR97 1041 aaKnown RBP18.16■□□□□ 0.5
SHTN1-203ENST00000392901 SRRM3A6NNA2 597 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms