RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 MAGEB5Q9BZ81 275 aa13.98□□□□□ -0.17
SEC13-203ENST00000383801 UBE2OQ9C0C9 1292 aaKnown RBP13.98□□□□□ -0.17
SEC13-203ENST00000383801 PRDM12Q9H4Q4 367 aa13.98□□□□□ -0.17
SEC13-203ENST00000383801 EURLQ9NYK6 297 aa13.98□□□□□ -0.17
SEC13-203ENST00000383801 PPARGC1AQ9UBK2 798 aaKnown RBP13.98□□□□□ -0.17
SEC13-203ENST00000383801 AFF4Q9UHB7 1163 aaKnown RBP13.98□□□□□ -0.17
SEC13-203ENST00000383801 ATP11BQ9Y2G3 1177 aa13.98□□□□□ -0.17
SEC13-203ENST00000383801 TEX264Q9Y6I9 313 aa13.98□□□□□ -0.17
SEC13-203ENST00000383801 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 EXOC1LA0A1B0GW35 172 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 FAM72CH0Y354 149 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 I6L893 689 aaPredicted RBP13.97□□□□□ -0.17
SEC13-203ENST00000383801 SOD2P04179 222 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 ZDHHC11BP0C7U3 371 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 LAG3P18627 525 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 CCNCP24863 283 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 PPP3CCP48454 512 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 GATMP50440 423 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 AP1B1Q10567 949 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 LONRF1Q17RB8 773 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 FNBP1LQ5T0N5 605 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 FAM72AQ5TYM5 149 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 ITPRIPL1Q6GPH6 555 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 FAM72DQ6L9T8 149 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 ZNF771Q7L3S4 317 aaPredicted RBP13.97□□□□□ -0.17
SEC13-203ENST00000383801 FAM72BQ86X60 149 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 TMEM199Q8N511 208 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 ATP6V0D2Q8N8Y2 350 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 ATAD1Q8NBU5 361 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 FBXO36Q8NEA4 188 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 CCDC110Q8TBZ0 833 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 CASP10Q92851 521 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 ARHGEF2Q92974 986 aaKnown RBP13.97□□□□□ -0.17
SEC13-203ENST00000383801 FATE1Q969F0 183 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 FBXO32Q969P5 355 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 TBC1D31Q96DN5 1066 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 PWWP2AQ96N64 755 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 ACSS3Q9H6R3 686 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 VPS37BQ9H9H4 285 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 NMUR1Q9HB89 426 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 ANLNQ9NQW6 1124 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.97□□□□□ -0.17
SEC13-203ENST00000383801 HTTP42858 3142 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 CLUHO75153 1309 aa13.97□□□□□ -0.17
SEC13-203ENST00000383801 MYCP01106 439 aaPredicted RBP13.96□□□□□ -0.17
SEC13-203ENST00000383801 APOEP02649 317 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 APRTP07741 180 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 HPDP32754 393 aaPredicted RBP13.96□□□□□ -0.17
SEC13-203ENST00000383801 GARSP41250 739 aaKnown RBP13.96□□□□□ -0.17
SEC13-203ENST00000383801 GEMIN4P57678 1058 aaKnown RBP13.96□□□□□ -0.17
SEC13-203ENST00000383801 GNGT1P63211 74 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 DSG1Q02413 1049 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 CREMQ03060 361 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 TRIP4Q15650 581 aaPredicted RBP13.96□□□□□ -0.17
SEC13-203ENST00000383801 PSMD5Q16401 504 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 MGAT5BQ3V5L5 792 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 ARMC3Q5W041 872 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 NUGGCQ68CJ6 796 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 KIAA1841Q6NSI8 718 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 KLHDC10Q6PID8 442 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 RNF19BQ6ZMZ0 732 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.96□□□□□ -0.174e-12■■■■■ 32
SEC13-203ENST00000383801 NECAB2Q7Z6G3 386 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 EXOC3L1Q86VI1 746 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 COLGALT1Q8NBJ5 622 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 CCNYQ8ND76 341 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 ZNF461Q8TAF7 563 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 ZNF558Q96NG5 402 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 CYTH2Q99418 400 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 LGMNQ99538 433 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 DNAJC17Q9NVM6 304 aaKnown RBP13.96□□□□□ -0.17
SEC13-203ENST00000383801 RABGEF1Q9UJ41 708 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 SSX2IPQ9Y2D8 614 aa13.96□□□□□ -0.17
SEC13-203ENST00000383801 DNAH12Q6ZR08 3092 aa13.96□□□□□ -0.18
SEC13-203ENST00000383801 MYO16Q9Y6X6 1858 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 GREB1Q4ZG55 1949 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 TCRBV7S3A2A0A539 114 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 GOLGA8MH3BSY2 632 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 PAGE1O75459 146 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 ABLIM3O94929 683 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 METTL18O95568 372 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 VAV1P15498 845 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 STX2P32856 288 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 PPM1AP35813 382 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 TBX4P57082 545 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 GPX6P59796 221 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 WASHC5Q12768 1159 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 BBS9Q3SYG4 887 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 TEX44Q53QW1 395 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 TIGD7Q6NT04 549 aaPredicted RBP13.95□□□□□ -0.18
SEC13-203ENST00000383801 LRRC8BQ6P9F7 803 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 ADGRD1Q6QNK2 874 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 LRRC31Q6UY01 552 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 UHMK1Q8TAS1 419 aaKnown RBP13.95□□□□□ -0.18
SEC13-203ENST00000383801 MAML1Q92585 1016 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 ZBTB9Q96C00 473 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 VWCEQ96DN2 955 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 TMEM169Q96HH4 297 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 BTN2A3PQ96KV6 586 aa13.95□□□□□ -0.18
SEC13-203ENST00000383801 FCRL2Q96LA5 508 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms