RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 ADGRA2Q96PE1 1338 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 KPNA3O00505 521 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 RECQL4O94761 1208 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 MRPS15P82914 257 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 TUSC3Q13454 348 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 RRP1BQ14684 758 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PARP6Q2NL67 630 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 KRT73Q86Y46 540 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 RGL4Q8IZJ4 473 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 SLC22A17Q8WUG5 538 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 NSL1Q96IY1 281 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ZFYVE19Q96K21 471 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 LRRC1Q9BTT6 524 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PRR23AA6NEV1 266 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 TCP11X1B4DZS4 312 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CACNB4O00305 520 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 TLL1O43897 1013 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 DUSP11O75319 330 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ADCYAP1R1P41586 468 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 NDUFV1P49821 464 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 NUP107P57740 925 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 NCF4Q15080 339 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 KYNUQ16719 465 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 STRADAQ7RTN6 431 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 CENPLQ8N0S6 344 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 AADATQ8N5Z0 425 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 EIF1ADQ8N9N8 165 aaKnown RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 TC2NQ8N9U0 490 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 MTMR14Q8NCE2 650 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 OSBPL10Q9BXB5 764 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 FAM126AQ9BYI3 521 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 THAP2Q9H0W7 228 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 GPRC5CQ9NQ84 441 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 AGPAT5Q9NUQ2 364 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.33□□□□□ -1.24
CCDC171-201ENST00000380701 GNPTGQ9UJJ9 305 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ADAM28Q9UKQ2 775 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 PCDHA11Q9Y5I1 949 aa7.33□□□□□ -1.24
CCDC171-201ENST00000380701 ESYT3A0FGR9 886 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 SPATA31C2B4DYI2 1134 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 APODP05090 189 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 NPR3P17342 541 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 HDCP19113 662 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 KLRK1P26718 216 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 TM4SF1P30408 202 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 C21orf59P57076 290 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 ELP6Q0PNE2 266 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 ADIGQ0VDE8 80 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 MMRN1Q13201 1228 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 ATP6AP1LQ52LC2 224 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 DEPDC1Q5TB30 811 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 AGMOQ6ZNB7 445 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 PARP9Q8IXQ6 854 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 CCDC185Q8N715 623 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 BTN2A2Q8WVV5 523 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 CXorf40BQ96DE9 158 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 RMDN2Q96LZ7 410 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 PPP1R10Q96QC0 940 aaKnown RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 SLC45A1Q9Y2W3 748 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 TCRBV5S4A2TA0A5A2 114 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 RBM47A0AV96 593 aaKnown RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 LACTBL1A8MY62 500 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 AVILO75366 819 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 SGPL1O95470 568 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 FGBP02675 491 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 GYPCP04921 128 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 CYP3A5P20815 502 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 LSP1P33241 339 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 PLOD1Q02809 727 aaPredicted RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 TEAD4Q15561 434 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 LONRF1Q17RB8 773 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 LRRC8DQ7L1W4 858 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 KSR1Q8IVT5 923 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 NUP93Q8N1F7 819 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 DPP10Q8N608 796 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 COLGALT1Q8NBJ5 622 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 PNKPQ96T60 521 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 TRIM51Q9BSJ1 452 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 CNGB3Q9NQW8 809 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 TMEM216Q9P0N5 145 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 APOC4-APOC2K7ER74 178 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 SLITRK3O94933 977 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 APOC2P02655 101 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 MRPL28Q13084 256 aaKnown RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 C1DQ13901 141 aaKnown RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 SMTNL2Q2TAL5 461 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 IL17RAQ96F46 866 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 SPACA7Q96KW9 195 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 TBL1YQ9BQ87 522 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 PADI4Q9UM07 663 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 RGS14O43566 566 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 CNOT3O75175 753 aaKnown RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 AMD1P17707 334 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 TTPAP49638 278 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 DDX39BQ13838 428 aaKnown RBP7.32□□□□□ -1.24
CCDC171-201ENST00000380701 CHI3L2Q15782 390 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 SGO1Q5FBB7 561 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 AFTPHQ6ULP2 937 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 SERPINA13PQ6UXR4 307 aa7.32□□□□□ -1.24
CCDC171-201ENST00000380701 FBXO39Q8N4B4 442 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms