RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 OR1D2P34982 312 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 ADRA1BP35368 520 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 ATP5C1P36542 298 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 GPD2P43304 727 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 PURAQ00577 322 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 POU5F1Q01860 360 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 GHRHRQ02643 423 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 CDH17Q12864 832 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 SOWAHAQ2M3V2 549 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 HSP90AA5PQ58FG0 334 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 MREGQ8N565 214 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 KAT2BQ92831 832 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 SPATA13Q96N96 652 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 SUDS3Q9H7L9 328 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 XIRP1Q702N8 1843 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 PAPSS1O43252 624 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 MYL2P10916 166 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 SCTRP47872 440 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 PLD1Q13393 1074 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 POLD3Q15054 466 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 PKN2Q16513 984 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 GDF6Q6KF10 455 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 STRADAQ7RTN6 431 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 TRPM8Q7Z2W7 1104 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 FAM136AQ96C01 138 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 ATP13A1Q9HD20 1204 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 CTNNAL1Q9UBT7 734 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 SUN2Q9UH99 717 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 SFMBT1Q9UHJ3 866 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 TRIM33Q9UPN9 1127 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 Q9Y3F1 56 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 ABCA3Q99758 1704 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 SERPINF2P08697 491 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 PSMB4P28070 264 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 ZNF135P52742 658 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 ITIH5Q86UX2 942 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 ART4Q93070 314 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 PPWD1Q96BP3 646 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 NFKBIZQ9BYH8 718 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 TIMM44O43615 452 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 CHRM3P20309 590 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 CDKN2BP42772 138 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 ALDH18A1P54886 795 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 CRADDP78560 199 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 KDSRQ06136 332 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 DUSP4Q13115 394 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 MRNIPQ6NTE8 343 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 TTC27Q6P3X3 843 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 IQCKQ8N0W5 287 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 PCED1BQ96HM7 432 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 LRGUKQ96M69 825 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 PKP3Q9Y446 797 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 IGKV6D-21A0A0A0MT36 114 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 KIF1CO43896 1103 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 DAB1O75553 588 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 CNMDO75829 334 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 CD48P09326 243 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 FGFR1P11362 822 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 AKT1P31749 480 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 CYP2C18P33260 490 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 GBE1Q04446 702 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 KBTBD12Q3ZCT8 623 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 RAP1GAP2Q684P5 730 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 PTRHD1Q6GMV3 140 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 MTBPQ96DY7 904 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 DCUN1D1Q96GG9 259 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 CDK5RAP1Q96SZ6 601 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 KCNK16Q96T55 309 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 SIX4Q9UIU6 781 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 GABRQQ9UN88 632 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 DNAJC25-GNG10A0A024R161 153 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 MOXD2PA6NHM9 499 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 WEE1P30291 646 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 RANBP1P43487 201 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 GLRBP48167 497 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 RHOAP61586 193 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 MAP7Q14244 749 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 PARP6Q2NL67 630 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 TTC30AQ86WT1 665 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 DDIASQ8IXT1 998 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 DPF3Q92784 378 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 VAT1Q99536 393 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 HNRNPABQ99729 332 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 EPS15L1Q9UBC2 864 aa14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 MYO5AQ9Y4I1 1855 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-203ENST00000378679 GOLGA8TH3BQL2 631 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 PFDN1O60925 122 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 BANF1O75531 89 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 PYGLP06737 847 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 NDUFV1P49821 464 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 ARHGEF7Q14155 803 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 SKIV2LQ15477 1246 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 USP41Q3LFD5 358 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 C1orf220Q5T0J3 134 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 MAMDC4Q6UXC1 1216 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 MON1AQ86VX9 555 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 FAXDC2Q96IV6 333 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 TRIM54Q9BYV2 358 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 NUF2Q9BZD4 464 aa14.53□□□□□ -0.08
SHROOM1-203ENST00000378679 EFR3BQ9Y2G0 817 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms