RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TBC1D13Q9NVG8 400 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 CFAP73A6NFT4 308 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 PPEF2O14830 753 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 CDK16Q00536 496 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 PLD1Q13393 1074 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 FAM83EQ2M2I3 478 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 STK32AQ8WU08 396 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 TEKT4Q8WW24 435 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 MAGEB16A2A368 324 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 PIAS1O75925 651 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 KLRC2P26717 231 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 AKT1P31749 480 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 MAP2K2P36507 400 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 AUHQ13825 339 aaKnown RBP14.88□□□□□ -0.03
TCOF1-202ENST00000377797 ARHGEF7Q14155 803 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 PCED1BQ96HM7 432 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 FAM161BQ96MY7 647 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 UBXN6Q9BZV1 441 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 SRRDQ9UH36 339 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 SFMBT1Q9UHJ3 866 aa14.88□□□□□ -0.03
TCOF1-202ENST00000377797 BANF1O75531 89 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 CNMDO75829 334 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 ENO1P06733 434 aaKnown RBP14.87□□□□□ -0.03
TCOF1-202ENST00000377797 CD48P09326 243 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 CNTFP26441 200 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 GJA5P36382 358 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 PEX5P50542 639 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 RHOAP61586 193 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 FAAP100Q0VG06 881 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 RAP1GAP2Q684P5 730 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 LPIN3Q9BQK8 851 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 UBE2OQ9C0C9 1292 aaKnown RBP14.87□□□□□ -0.03
TCOF1-202ENST00000377797 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.87□□□□□ -0.03
TCOF1-202ENST00000377797 CACNG4Q9UBN1 327 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 DCDC2Q9UHG0 476 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 C2CD4BA6NLJ0 364 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 RHOBTB1O94844 696 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 GP5P40197 560 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 GLRBP48167 497 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 SERPINB8P50452 374 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 CRADDP78560 199 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 C1orf220Q5T0J3 134 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 GDF6Q6KF10 455 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-202ENST00000377797 DBF4BQ8NFT6 615 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 CDHR5Q9HBB8 845 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 EML4Q9HC35 981 aaKnown RBP14.87□□□□□ -0.03
TCOF1-202ENST00000377797 MOXD2PA6NHM9 499 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 NUDT17P0C025 328 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 GBE1Q04446 702 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 NOMO1Q15155 1222 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 MAMDC4Q6UXC1 1216 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 HERC6Q8IVU3 1022 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 TCP10LQ8TDR4 215 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 KAT2BQ92831 832 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 CSPG4P5Q96PW8 444 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 SIX4Q9UIU6 781 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 MTO1Q9Y2Z2 717 aaKnown RBP14.87□□□□□ -0.03
TCOF1-202ENST00000377797 DNAJC25-GNG10A0A024R161 153 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 FGF10O15520 208 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-202ENST00000377797 STMN1P16949 149 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 USP41Q3LFD5 358 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 NUDT18Q6ZVK8 323 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 MON1AQ86VX9 555 aa14.87□□□□□ -0.03
TCOF1-202ENST00000377797 SUDS3Q9H7L9 328 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-202ENST00000377797 RPSAP08865 295 aaKnown RBP14.86□□□□□ -0.03
TCOF1-202ENST00000377797 OR1D2P34982 312 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 NKD2Q969F2 451 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-202ENST00000377797 FAM136AQ96C01 138 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 STRA6Q9BX79 667 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 NEUROG2Q9H2A3 272 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 SCUBE2Q9NQ36 999 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 OR6C75A6NL08 312 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 VAPBO95292 243 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 PGAM1P18669 254 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 NPY2RP49146 381 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 INTS6LQ5JSJ4 861 aaKnown RBP14.86□□□□□ -0.03
TCOF1-202ENST00000377797 C1orf146Q5VVC0 180 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 ARHGAP17Q68EM7 881 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 PSTKQ8IV42 348 aaKnown RBP14.86□□□□□ -0.03
TCOF1-202ENST00000377797 OR52K1Q8NGK4 314 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 SCAMP3O14828 347 aaKnown RBP14.86□□□□□ -0.03
TCOF1-202ENST00000377797 IMPG1Q17R60 797 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 PTAR1Q7Z6K3 402 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-202ENST00000377797 SAPCD2Q86UD0 394 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 PLD5Q8N7P1 536 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 USP13Q92995 863 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-202ENST00000377797 BAG5Q9UL15 447 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 ACOT9Q9Y305 439 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 A0A1B0GUL6 1792 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 GOLGA8TH3BQL2 631 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 NVLO15381 856 aaKnown RBP14.86□□□□□ -0.03
TCOF1-202ENST00000377797 NDUFV1P49821 464 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 DUSP4Q13115 394 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 MTA1Q13330 715 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 PSMD5Q16401 504 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 HECTD3Q5T447 861 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 FCRL2Q96LA5 508 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-202ENST00000377797 KCNK16Q96T55 309 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 CDY1Q9Y6F8 540 aa14.86□□□□□ -0.03
TCOF1-202ENST00000377797 FGFR1P11362 822 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms