RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 RRN3Q9NYV6 651 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 STIM2Q9P246 746 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 SIK3Q9Y2K2 1263 aa17.44■□□□□ 0.38
HMGN4-201ENST00000377575 SYNJ2BP-COX16A0A087WUM0 186 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 WASH3PC4AMC7 463 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 F5H5T6 163 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 GFPT2O94808 682 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 ATP5BP06576 529 aaKnown RBP17.43■□□□□ 0.38
HMGN4-201ENST00000377575 NOS2P35228 1153 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 SOX5P35711 763 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 SCNN1AP37088 669 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 GABRB2P47870 512 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 DHPSP49366 369 aaPredicted RBP17.43■□□□□ 0.38
HMGN4-201ENST00000377575 JAM2P57087 298 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 PITX1P78337 314 aaPredicted RBP17.43■□□□□ 0.38
HMGN4-201ENST00000377575 UBXN1Q04323 297 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 NCAPHQ15003 741 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 SYCP1Q15431 976 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 FNDC3BQ53EP0 1204 aaKnown RBP17.43■□□□□ 0.38
HMGN4-201ENST00000377575 SPDYCQ5MJ68 293 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 PLA2G2CQ5R387 149 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 TMEM215Q68D42 235 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 SLC36A4Q6YBV0 504 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 CYP2U1Q7Z449 544 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 KIAA0907Q7Z7F0 614 aaPredicted RBP17.43■□□□□ 0.38
HMGN4-201ENST00000377575 ERICH1Q86X53 443 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 RNF34Q969K3 372 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 C18orf8Q96DM3 657 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 BPIFA3Q9BQP9 254 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 NLRC4Q9NPP4 1024 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 DLL3Q9NYJ7 618 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 COX16Q9P0S2 106 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 STAP1Q9ULZ2 295 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 PLA2G4CQ9UP65 541 aa17.43■□□□□ 0.38
HMGN4-201ENST00000377575 NYNRINQ9P2P1 1898 aaKnown RBP17.43■□□□□ 0.38
HMGN4-201ENST00000377575 BCLAF3A2AJT9 711 aaKnown RBP17.42■□□□□ 0.38
HMGN4-201ENST00000377575 KCNU1A8MYU2 1149 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 AP5Z1O43299 807 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 CAVIN2O95810 425 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 MMEP08473 750 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 TACR2P21452 398 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 STAT1P42224 750 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 DPP6P42658 865 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 MATKP42679 507 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 RPS24P62847 133 aaKnown RBP17.42■□□□□ 0.38
HMGN4-201ENST00000377575 EIF4EBP2Q13542 120 aaPredicted RBP17.42■□□□□ 0.38
HMGN4-201ENST00000377575 CCDC6Q16204 474 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 FUT11Q495W5 492 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 FAM102AQ5T9C2 384 aaPredicted RBP17.42■□□□□ 0.38
HMGN4-201ENST00000377575 TTC39BQ5VTQ0 682 aaPredicted RBP17.42■□□□□ 0.38
HMGN4-201ENST00000377575 RAP1GAP2Q684P5 730 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 MBLAC2Q68D91 279 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 KIAA1324Q6UXG2 1013 aaKnown RBP17.42■□□□□ 0.38
HMGN4-201ENST00000377575 ERMP1Q7Z2K6 904 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 LGI2Q8N0V4 545 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 CARNMT1Q8N4J0 409 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 FIBINQ8TAL6 211 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 WFDC5Q8TCV5 224 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 SORCS1Q8WY21 1168 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 ERLEC1Q96DZ1 483 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 MRGPRX1Q96LB2 322 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 ERGIC2Q96RQ1 377 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 TMEM51Q9NW97 253 aa17.42■□□□□ 0.38
HMGN4-201ENST00000377575 XPO7Q9UIA9 1087 aaKnown RBP17.42■□□□□ 0.38
HMGN4-201ENST00000377575 MBD1Q9UIS9 605 aaPredicted RBP17.42■□□□□ 0.38
HMGN4-201ENST00000377575 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.41■□□□□ 0.38
HMGN4-201ENST00000377575 LRRC10BA6NIK2 292 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 SMTNL1A8MU46 457 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 EPHB6O15197 1021 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 LUC7L3O95232 432 aaKnown RBP17.41■□□□□ 0.38
HMGN4-201ENST00000377575 EPHX1P07099 455 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 DLDP09622 509 aaKnown RBP17.41■□□□□ 0.38
HMGN4-201ENST00000377575 POLR2EP19388 210 aaKnown RBP17.41■□□□□ 0.38
HMGN4-201ENST00000377575 PRKCHP24723 683 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 CD70P32970 193 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 NOMO3P69849 1222 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 CDR2Q01850 454 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 RPL6Q02878 288 aaKnown RBP17.41■□□□□ 0.38
HMGN4-201ENST00000377575 NME3Q13232 169 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 SF3A2Q15428 464 aaKnown RBP17.41■□□□□ 0.38
HMGN4-201ENST00000377575 RABGAP1LQ5R372 815 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 DGLUCYQ7Z3D6 616 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 ADIPOR2Q86V24 386 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 XYLT1Q86Y38 959 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 CYB5D2Q8WUJ1 264 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 RTKNQ9BST9 563 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 HSD3B7Q9H2F3 369 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 PRDM16Q9HAZ2 1276 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.41■□□□□ 0.38
HMGN4-201ENST00000377575 NOCTQ9UK39 431 aaKnown RBP17.41■□□□□ 0.38
HMGN4-201ENST00000377575 CYP8B1Q9UNU6 501 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 PAXBP1Q9Y5B6 917 aa17.41■□□□□ 0.38
HMGN4-201ENST00000377575 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.4■□□□□ 0.38
HMGN4-201ENST00000377575 IGHV1OR15-9A0A0B4J2B8 117 aa17.4■□□□□ 0.38
HMGN4-201ENST00000377575 H0Y626 953 aa17.4■□□□□ 0.38
HMGN4-201ENST00000377575 M0QYT0 321 aa17.4■□□□□ 0.38
HMGN4-201ENST00000377575 MOCS3O95396 460 aa17.4■□□□□ 0.38
HMGN4-201ENST00000377575 SULT1E1P49888 294 aa17.4■□□□□ 0.38
HMGN4-201ENST00000377575 RNASE9P60153 205 aaKnown RBP17.4■□□□□ 0.38
HMGN4-201ENST00000377575 LMAN2Q12907 356 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms