RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 VANGL2Q9ULK5 521 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 ZNF510Q9Y2H8 683 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 NUMBLQ9Y6R0 609 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 ECI2O75521 394 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 GOT1P17174 413 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 IL4RP24394 825 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 HOXC13P31276 330 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 SGSHP51688 502 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 FCHO2Q0JRZ9 810 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 MMRN1Q13201 1228 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 ZNF211Q13398 564 aaPredicted RBP22.01■■□□□ 1.11
CBWD3-202ENST00000377342 TAZQ16635 292 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 PUS10Q3MIT2 529 aaKnown RBP22.01■■□□□ 1.11
CBWD3-202ENST00000377342 FBXL22Q6P050 247 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 MFSD7Q6UXD7 560 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 MTSS1LQ765P7 747 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 CPXM2Q8N436 756 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 IGSF8Q969P0 613 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 RNF25Q96BH1 459 aaPredicted RBP22.01■■□□□ 1.11
CBWD3-202ENST00000377342 RPGRIP1Q96KN7 1286 aa22.01■■□□□ 1.11
CBWD3-202ENST00000377342 CWC15Q9P013 229 aaKnown RBP22.01■■□□□ 1.11
CBWD3-202ENST00000377342 TICRRQ7Z2Z1 1910 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 IGLV3-10A0A075B6K4 115 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 E9PAM4 449 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 TRDMT1O14717 391 aaKnown RBP22■■□□□ 1.11
CBWD3-202ENST00000377342 PYGMP11217 842 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 KRT81Q14533 505 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 PDK2Q15119 407 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 ZFYVE27Q5T4F4 411 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 PAPD7Q5XG87 772 aaKnown RBP22■■□□□ 1.11
CBWD3-202ENST00000377342 E2F7Q96AV8 911 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 FAF2Q96CS3 445 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 ZFYVE19Q96K21 471 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 HERPUD2Q9BSE4 406 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 LINC00597Q9H2U6 94 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 SNX12Q9UMY4 172 aa22■■□□□ 1.11
CBWD3-202ENST00000377342 MYO10Q9HD67 2058 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 CTAGE9A4FU28 777 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 KCNK3O14649 394 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 CREB3O43889 395 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 CXCR5P32302 372 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 CDKN2BP42772 138 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 AMPD2Q01433 879 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 GRM2Q14416 872 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 C5orf22Q49AR2 442 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 SPOCD1Q6ZMY3 1216 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 MFSD6LQ8IWD5 586 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 ZDHHC14Q8IZN3 488 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 LGI2Q8N0V4 545 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 KCTD6Q8NC69 237 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 OSCP1Q8WVF1 389 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 RSAD2Q8WXG1 361 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 CSPG4P5Q96PW8 444 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 EPAS1Q99814 870 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 ZNF670Q9BS34 389 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 CALN1Q9BXU9 219 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 CARD9Q9H257 536 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 NR2E1Q9Y466 385 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 CHD5Q8TDI0 1954 aa21.99■■□□□ 1.11
CBWD3-202ENST00000377342 KIAA1549LQ6ZVL6 1849 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 F5H5T6 163 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 ZRANB2O95218 330 aaKnown RBP eCLIP21.98■■□□□ 1.11
CBWD3-202ENST00000377342 DPYSQ14117 519 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 EML3Q32P44 896 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 ACBD5Q5T8D3 534 aaPredicted RBP21.98■■□□□ 1.11
CBWD3-202ENST00000377342 TRIM68Q6AZZ1 485 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 RBM41Q96IZ5 413 aaKnown RBP21.98■■□□□ 1.11
CBWD3-202ENST00000377342 RCOR3Q9P2K3 495 aaPredicted RBP21.98■■□□□ 1.11
CBWD3-202ENST00000377342 TBC1D14Q9P2M4 693 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 FAM50BQ9Y247 325 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 EEF2KO00418 725 aaKnown RBP21.98■■□□□ 1.11
CBWD3-202ENST00000377342 SRGAP2O75044 1071 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 TPI1P60174 286 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 RPS24P62847 133 aaKnown RBP21.98■■□□□ 1.11
CBWD3-202ENST00000377342 RFX8Q6ZV50 586 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 CIR1Q86X95 450 aaPredicted RBP21.98■■□□□ 1.11
CBWD3-202ENST00000377342 VSIG1Q86XK7 387 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 RCOR2Q8IZ40 523 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 DEPDC1BQ8WUY9 529 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 OTUB2Q96DC9 234 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 TBC1D31Q96DN5 1066 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 OSBPL9Q96SU4 736 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 DDX50Q9BQ39 737 aaKnown RBP21.98■■□□□ 1.11
CBWD3-202ENST00000377342 FAM83CQ9BQN1 747 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 ARHGEF4Q9NR80 690 aa21.98■■□□□ 1.11
CBWD3-202ENST00000377342 hCG_1818297A0A087WSY0 165 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 DRGXA6NNA5 263 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 ZNF487B1APH4 448 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 H3BRJ5 948 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 KIF2AO00139 706 aaPredicted RBP21.97■■□□□ 1.11
CBWD3-202ENST00000377342 TSPAN3O60637 253 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 PSMC3P17980 439 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 CASQ1P31415 396 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 LLGL1Q15334 1064 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 ALFQ53S48 1182 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 CCDC50Q8IVM0 306 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 PCDH19Q8TAB3 1148 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 COG1Q8WTW3 980 aa21.97■■□□□ 1.11
CBWD3-202ENST00000377342 RPRD1AQ96P16 312 aaPredicted RBP21.97■■□□□ 1.11
CBWD3-202ENST00000377342 DUS2Q9NX74 493 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms