RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 TTC34A8MYJ7 566 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 H0YGN5 161 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 J3KTA2 159 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 LDHAP00338 332 aaKnown RBP2.53□□□□□ -2
VPS13A-206ENST00000376646 WNT1P04628 370 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 EGR1P18146 543 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 TFEBP19484 476 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 P2RX3P56373 397 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 ATP1A4Q13733 1029 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 ANXA2RQ3ZCQ2 193 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 ASPHD1Q5U4P2 390 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 HMBOX1Q6NT76 420 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 MSANTD2Q6P1R3 559 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 KRT27Q7Z3Y8 459 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 TXLNBQ8N3L3 684 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 B4GALNT2Q8NHY0 566 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 ASB12Q8WXK4 309 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 NPIPB3Q92617 1050 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 ZNF347Q96SE7 839 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 ZPBPQ9BS86 351 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 RNF26Q9BY78 433 aaPredicted RBP2.53□□□□□ -2
VPS13A-206ENST00000376646 DECR2Q9NUI1 292 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 DAAM1Q9Y4D1 1078 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 RIPOR2Q9Y4F9 1068 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 INSL5Q9Y5Q6 135 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 COMMD10Q9Y6G5 202 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 DHHO43323 396 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 TAF5LO75529 589 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 VIPP01282 170 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 CBSLP0DN79 551 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 AKR1A1P14550 325 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 ARRB2P32121 409 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 CBSP35520 551 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 SHC2P98077 582 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 GAD2Q05329 585 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 LONRF1Q17RB8 773 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 SLC5A9Q2M3M2 681 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 ARL13BQ3SXY8 428 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 C10orf62Q5T681 223 aaPredicted RBP2.53□□□□□ -2
VPS13A-206ENST00000376646 ZNF474Q6S9Z5 364 aaPredicted RBP2.53□□□□□ -2
VPS13A-206ENST00000376646 SRLQ86TD4 932 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 MORC1Q86VD1 984 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 SLC22A17Q8WUG5 538 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 KAT2AQ92830 837 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 KAT2BQ92831 832 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 C18orf8Q96DM3 657 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 ZNF479Q96JC4 524 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 TNIP3Q96KP6 325 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 SNX27Q96L92 541 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 GDF15Q99988 308 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 ELAC2Q9BQ52 826 aaKnown RBP2.53□□□□□ -2
VPS13A-206ENST00000376646 RGL1Q9NZL6 768 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 FNIP2Q9P278 1114 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 EVPLQ92817 2033 aa2.53□□□□□ -2
VPS13A-206ENST00000376646 EMSYQ7Z589 1322 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 KIR2DS5A0A0G2JLQ3 304 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 KIR2DS3K7RE56 304 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 TNFRSF13BO14836 293 aaPredicted RBP2.52□□□□□ -2.01
VPS13A-206ENST00000376646 NPC1O15118 1278 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 ENO1P06733 434 aaKnown RBP2.52□□□□□ -2.01
VPS13A-206ENST00000376646 MATN1P21941 496 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 SERPINB3P29508 390 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 SLC5A2P31639 672 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 ALDH7A1P49419 539 aaKnown RBP2.52□□□□□ -2.01
VPS13A-206ENST00000376646 AK2P54819 239 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 SLC37A1P57057 533 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 SLC35G1Q2M3R5 365 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 FAM209BQ5JX69 171 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 PIK3CD-AS1Q5SR53 167 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 BEND5Q7L4P6 421 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 C11orf96Q7Z7L8 435 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 GPSM1Q86YR5 675 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 LAS2Q8IYD9 372 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 EXOC8Q8IYI6 725 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 BCAS4Q8TDM0 211 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 GLMPQ8WWB7 406 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 ABHD14AQ9BUJ0 271 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 TRIM2Q9C040 744 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 TAGLN3Q9UI15 199 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 IPO11Q9UI26 975 aaKnown RBP2.52□□□□□ -2.01
VPS13A-206ENST00000376646 OR2W5A6NFC9 320 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 ZC3H11AO75152 810 aaKnown RBP eCLIP2.52□□□□□ -2.01
VPS13A-206ENST00000376646 ITGA5P08648 1049 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 MMP8P22894 467 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 TNFSF4P23510 183 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 TNFRSF8P28908 595 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 CIITAP33076 1130 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 GRM4Q14833 912 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 KIAA1755Q5JYT7 1200 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 C6orf10Q5SRN2 563 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 LVRNQ6Q4G3 990 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 CERS3Q8IU89 383 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 DDIASQ8IXT1 998 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 MORC4Q8TE76 937 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 ZFPM2Q8WW38 1151 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 OIT3Q8WWZ8 545 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 INPP5DQ92835 1189 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 THOC3Q96J01 351 aaKnown RBP2.52□□□□□ -2.01
VPS13A-206ENST00000376646 MYD88Q99836 296 aa2.52□□□□□ -2.01
VPS13A-206ENST00000376646 ARPC5LQ9BPX5 153 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms