RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 MAP3K7CLP57077 242 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 POLR2FP61218 127 aaKnown RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 DRAP1Q14919 205 aaPredicted RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 COL28A1Q2UY09 1125 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 FUT11Q495W5 492 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 PPP1R26Q5T8A7 1209 aaPredicted RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 ARHGAP17Q68EM7 881 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 SMYD5Q6GMV2 418 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 C19orf48Q6RUI8 117 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 GALNT15Q8N3T1 639 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 NEK11Q8NG66 645 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 BAHD1Q8TBE0 780 aaPredicted RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 SLC2A14Q8TDB8 520 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 CYFIP2Q96F07 1278 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 TOE1Q96GM8 510 aaKnown RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 PCMTD1Q96MG8 357 aaPredicted RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 HNRNPABQ99729 332 aaKnown RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 STK33Q9BYT3 514 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 SLC6A17Q9H1V8 727 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 ACP6Q9NPH0 428 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 FAM49BQ9NUQ9 324 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 THAP10Q9P2Z0 257 aaPredicted RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 DNMT3LQ9UJW3 386 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 TP53BP1Q12888 1972 aaPredicted RBP12.69□□□□□ -0.38
LSM2-208ENST00000375661 WASH3PC4AMC7 463 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 DKK1O94907 266 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 PENKP01210 267 aaPredicted RBP12.69□□□□□ -0.38
LSM2-208ENST00000375661 FAM200BP0CF97 657 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 VDRP11473 427 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 CLCN1P35523 988 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 PGFP49763 221 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 JAM2P57087 298 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 RAPGEF1Q13905 1077 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 SUZ12Q15022 739 aaKnown RBP12.69□□□□□ -0.38
LSM2-208ENST00000375661 EIF4HQ15056 248 aaKnown RBP12.69□□□□□ -0.38
LSM2-208ENST00000375661 DCAF12L1Q5VU92 463 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 SARM1Q6SZW1 724 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 SLCO6A1Q86UG4 719 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 ZCCHC9Q8N567 271 aaKnown RBP12.69□□□□□ -0.38
LSM2-208ENST00000375661 SETD7Q8WTS6 366 aaKnown RBP12.69□□□□□ -0.38
LSM2-208ENST00000375661 TFAP2BQ92481 460 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 PRCCQ92733 491 aaPredicted RBP12.69□□□□□ -0.38
LSM2-208ENST00000375661 CDK5RAP1Q96SZ6 601 aaKnown RBP12.69□□□□□ -0.38
LSM2-208ENST00000375661 NUP58Q9BVL2 599 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 GPR174Q9BXC1 333 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 MKRN2Q9H000 416 aaKnown RBP12.69□□□□□ -0.38
LSM2-208ENST00000375661 GAREM1Q9H706 876 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 NLRC4Q9NPP4 1024 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 TM7SF3Q9NS93 570 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.69□□□□□ -0.38
LSM2-208ENST00000375661 OSER1Q9NX31 292 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 KIAA1257Q9ULG3 409 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
LSM2-208ENST00000375661 ACACAQ13085 2346 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 NBEAQ8NFP9 2946 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 HHLA1C9JL84 531 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 CYP26A1O43174 497 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 SYNCRIPO60506 623 aaKnown RBP12.68□□□□□ -0.38
LSM2-208ENST00000375661 STC2O76061 302 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 RARGP13631 454 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 KRT5P13647 590 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 CD19P15391 556 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 BRD2P25440 801 aaKnown RBP12.68□□□□□ -0.38
LSM2-208ENST00000375661 ADORA2BP29275 332 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 USP8P40818 1118 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 IL12RB1P42701 662 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 TPMTP51580 245 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 COG7P83436 770 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 SGO2Q562F6 1265 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 CLEC20AQ6ZU45 233 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 TMPRSS6Q8IU80 811 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 FAM71AQ8IYT1 594 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 SIPA1Q96FS4 1042 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 DCLK3Q9C098 648 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 TTYH3Q9C0H2 523 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 DNAI2Q9GZS0 605 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 MIR1-1HGQ9H1L0 117 aa12.68□□□□□ -0.38
LSM2-208ENST00000375661 FREM2Q5SZK8 3169 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 A0A1W2PQH9 124 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 E9PAM4 449 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 F8VZ95 297 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 O00370 1275 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 CBFA2T2O43439 604 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 TIMM44O43615 452 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 C7P10643 843 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 RALAP11233 206 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 ACADMP11310 421 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 BNC1Q01954 994 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 GEN1Q17RS7 908 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 HLA-BQ31612 363 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 C10orf120Q5SQS8 335 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 FYB2Q5VWT5 728 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 GPRIN1Q7Z2K8 1008 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 CCDC186Q7Z3E2 898 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 ANKS1BQ7Z6G8 1248 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 MDM1Q8TC05 714 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 BAP1Q92560 729 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 ERLEC1Q96DZ1 483 aa12.67□□□□□ -0.38
LSM2-208ENST00000375661 PIWIL1Q96J94 861 aaKnown RBP12.67□□□□□ -0.38
LSM2-208ENST00000375661 SLC2A11Q9BYW1 496 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms