RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 MT-ND1P03886 318 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 INSRRP14616 1297 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 KCNJ11Q14654 390 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 TMEM259Q4ZIN3 620 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 AMIGO2Q86SJ2 522 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 ENDOVQ8N8Q3 282 aaKnown RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 KHSRPQ92945 711 aaKnown RBP eCLIP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 RCN3Q96D15 328 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 RPL10LQ96L21 214 aaKnown RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 ZNF778Q96MU6 729 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 NDNQ99608 321 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 SLC39A3Q9BRY0 314 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 CENPKQ9BS16 269 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 CAAP1Q9H8G2 361 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 COG4Q9H9E3 785 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 SSX2IPQ9Y2D8 614 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 BUD23O43709 281 aaKnown RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 MOCS2O96007 188 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 CPA3P15088 417 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 GPD2P43304 727 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 ZNF143P52747 638 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 POU6F1Q14863 301 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 ATG14Q6ZNE5 492 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 RBM44Q6ZP01 1051 aaKnown RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 MAPK15Q8TD08 544 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 TBCBQ99426 244 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 EPAS1Q99814 870 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 TRPV6Q9H1D0 765 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 VCX3BQ9H321 246 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 SUDS3Q9H7L9 328 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 USP29Q9HBJ7 922 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 ETAA1Q9NY74 926 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 KCNK4Q9NYG8 393 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 TSPAN3O60637 253 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 DNAJA2O60884 412 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 ALDOAP04075 364 aaKnown RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 ARRB2P32121 409 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 ROR2Q01974 943 aaKnown RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 PDK3Q15120 406 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 STILQ15468 1287 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 SOWAHAQ2M3V2 549 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 TRMT5Q32P41 509 aaKnown RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 UTS2BQ765I0 119 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 TTC30AQ86WT1 665 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 NAT16Q8N8M0 369 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 TRPM4Q8TD43 1214 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 SLC2A14Q8TDB8 520 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 HASPINQ8TF76 798 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 PHF21BQ96EK2 531 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 APBA2Q99767 749 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 CPSF3Q9UKF6 684 aaKnown RBP12.11□□□□□ -0.47
MCF2L-202ENST00000375597 HMX2A2RU54 273 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 M0QYT0 321 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 ITGA2BP08514 1039 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 TGM2P21980 687 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 FOLH1Q04609 750 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 ITKQ08881 620 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 CTBP1Q13363 440 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 SLC12A1Q13621 1099 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 DNAL1Q4LDG9 190 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 TDRD5Q8NAT2 981 aaKnown RBP12.1□□□□□ -0.47
MCF2L-202ENST00000375597 SLC7A14Q8TBB6 771 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 HIC2Q96JB3 615 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 TSNARE1Q96NA8 513 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 EBNA1BP2Q99848 306 aaKnown RBP12.1□□□□□ -0.47
MCF2L-202ENST00000375597 PRDM12Q9H4Q4 367 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 THAP1Q9NVV9 213 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 ZNF212Q9UDV6 495 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 CDH22Q9UJ99 828 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 SLX4Q8IY92 1834 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 A0A088AWK7 358 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 A0A096LPK6 155 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 DFFAO00273 331 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 ZBTB14O43829 449 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 AHCYL1O43865 530 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 IGFBP6P24592 240 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-202ENST00000375597 IDH3AP50213 366 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 ADIGQ0VDE8 80 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 LRRC38Q5VT99 294 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-202ENST00000375597 ARHGAP17Q68EM7 881 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 PACS1Q6VY07 963 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 BHLHE22Q8NFJ8 381 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-202ENST00000375597 TUBB6Q9BUF5 446 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 PCDHAC1Q9H158 963 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 AS3MTQ9HBK9 375 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 S100A14Q9HCY8 104 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 CHRAC1Q9NRG0 131 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 GMPR2Q9P2T1 348 aaKnown RBP12.1□□□□□ -0.47
MCF2L-202ENST00000375597 AURKCQ9UQB9 309 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 POMPQ9Y244 141 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 TLL2Q9Y6L7 1015 aa12.1□□□□□ -0.47
MCF2L-202ENST00000375597 PLSCR1O15162 318 aa12.09□□□□□ -0.47
MCF2L-202ENST00000375597 ARF4P18085 180 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-202ENST00000375597 VCLP18206 1134 aa12.09□□□□□ -0.47
MCF2L-202ENST00000375597 ZNF132P52740 706 aa12.09□□□□□ -0.47
MCF2L-202ENST00000375597 ACTR3P61158 418 aa12.09□□□□□ -0.47
MCF2L-202ENST00000375597 TAP1Q03518 808 aa12.09□□□□□ -0.47
MCF2L-202ENST00000375597 USP10Q14694 798 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms