RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 GLRA3O75311 464 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 CRTAMO95727 393 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 PENKP01210 267 aaPredicted RBP14.07□□□□□ -0.16
USP49-201ENST00000373006 GJB1P08034 283 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 PCSK6P29122 969 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 TYK2P29597 1187 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 TCF7P36402 384 aaPredicted RBP14.07□□□□□ -0.16
USP49-201ENST00000373006 PKNOX1P55347 436 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 MYLK3Q32MK0 819 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 CCDC14Q49A88 953 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 PACS1Q6VY07 963 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 B3GNT6Q6ZMB0 384 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 USP13Q92995 863 aaPredicted RBP14.07□□□□□ -0.16
USP49-201ENST00000373006 LRRC39Q96DD0 335 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 ANKRD36BP1Q96IX9 119 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 LRGUKQ96M69 825 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 BTBD9Q96Q07 612 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 TMEM134Q9H6X4 195 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 COPG2Q9UBF2 871 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 DOLKQ9UPQ8 538 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 HEMK1Q9Y5R4 338 aaPredicted RBP14.07□□□□□ -0.16
USP49-201ENST00000373006 BCLAF3A2AJT9 711 aaKnown RBP14.06□□□□□ -0.16
USP49-201ENST00000373006 SPATA31C2B4DYI2 1134 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 CASQ2O14958 399 aaPredicted RBP14.06□□□□□ -0.16
USP49-201ENST00000373006 B4GALT5O43286 388 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 CXCL8P10145 99 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 ABCG1P45844 678 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 GTF2A2P52657 109 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 KLF10Q13118 480 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 EEPD1Q7L9B9 569 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 C12orf29Q8N999 325 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 RTP4Q96DX8 246 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 OR52B2Q96RD2 323 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 SIKE1Q9BRV8 207 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 WDR55Q9H6Y2 383 aaPredicted RBP14.06□□□□□ -0.16
USP49-201ENST00000373006 SSX2IPQ9Y2D8 614 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 AP4B1Q9Y6B7 739 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 ATP9BO43861 1147 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 AMHP03971 560 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 TFE3P19532 575 aaPredicted RBP14.06□□□□□ -0.16
USP49-201ENST00000373006 MAGEA3P43357 314 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 ATXN1P54253 815 aaKnown RBP14.06□□□□□ -0.16
USP49-201ENST00000373006 CBX3Q13185 183 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 STYK1Q6J9G0 422 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 XRRA1Q6P2D8 792 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 ZPBP2Q6X784 338 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 TIFABQ6ZNK6 161 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 TRIM67Q6ZTA4 783 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 HACE1Q8IYU2 909 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 MCUQ8NE86 351 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 HSPBAP1Q96EW2 488 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 TMEM176AQ96HP8 235 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 CDRT15Q96T59 188 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 SNRNP25Q9BV90 132 aaKnown RBP14.06□□□□□ -0.16
USP49-201ENST00000373006 DNAJC28Q9NX36 388 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 PTTG2Q9NZH5 202 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 NDUFA13Q9P0J0 144 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 SIX4Q9UIU6 781 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 MYO18AQ92614 2054 aaKnown RBP14.06□□□□□ -0.16
USP49-201ENST00000373006 A0A1B0GTW7 788 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 TMCC1O94876 653 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 FBXO21O94952 628 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 ITGB3P05106 788 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 PRKCBP05771 671 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 ERVK-10P10266 1014 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 MAGEA8P43361 318 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 MYBPC1Q00872 1141 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 STILQ15468 1287 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 MAP1SQ66K74 1059 aaPredicted RBP14.06□□□□□ -0.16
USP49-201ENST00000373006 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
USP49-201ENST00000373006 KCNT2Q6UVM3 1135 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 NAPRTQ6XQN6 538 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 MARVELD2Q8N4S9 558 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 KCNK16Q96T55 309 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 STN1Q9H668 368 aaKnown RBP14.06□□□□□ -0.16
USP49-201ENST00000373006 DCDC2Q9UHG0 476 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 PSMD13Q9UNM6 376 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 MFHAS1Q9Y4C4 1052 aa14.06□□□□□ -0.16
USP49-201ENST00000373006 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 KIAA1217Q5T5P2 1943 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 PDLIM1O00151 329 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 PEX1O43933 1283 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
USP49-201ENST00000373006 HSPA4LO95757 839 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 TCN1P20061 433 aaPredicted RBP14.05□□□□□ -0.16
USP49-201ENST00000373006 MGAT1P26572 445 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 MLH1P40692 756 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 CCR3P51677 355 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 SCUBE3Q8IX30 993 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 RBM12BQ8IXT5 1001 aaKnown RBP14.05□□□□□ -0.16
USP49-201ENST00000373006 PLD6Q8N2A8 252 aaKnown RBP14.05□□□□□ -0.16
USP49-201ENST00000373006 NLRP4Q96MN2 994 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 GNEQ9Y223 722 aaKnown RBP14.05□□□□□ -0.16
USP49-201ENST00000373006 H3BSA7 217 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 DENRO43583 198 aaKnown RBP14.05□□□□□ -0.16
USP49-201ENST00000373006 NFICP08651 508 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 CPA3P15088 417 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 XRCC1P18887 633 aaPredicted RBP14.05□□□□□ -0.16
USP49-201ENST00000373006 TGM2P21980 687 aa14.05□□□□□ -0.16
USP49-201ENST00000373006 CYP2F1P24903 491 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms