RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PCSK1P29120 753 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 SLC11A1P49279 550 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 MRPS5P82675 430 aaKnown RBP10.99□□□□□ -0.65
TPM3-212ENST00000368533 KLC1Q07866 573 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 INTS6LQ5JSJ4 861 aaKnown RBP10.99□□□□□ -0.65
TPM3-212ENST00000368533 FAM71DQ8N9W8 422 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 ETNK2Q9NVF9 386 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 DNAAF2Q9NVR5 837 aaKnown RBP10.99□□□□□ -0.65
TPM3-212ENST00000368533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.99□□□□□ -0.65
TPM3-212ENST00000368533 FRMPD3Q5JV73 1810 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 PRUNE2Q8WUY3 3088 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 ZNF638Q14966 1978 aaKnown RBP10.99□□□□□ -0.65
TPM3-212ENST00000368533 MSI1O43347 362 aaKnown RBP10.99□□□□□ -0.65
TPM3-212ENST00000368533 SETSIPP0DME0 302 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 CSF2RAP15509 400 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 GOT1P17174 413 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 CA4P22748 312 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 DNAJB2P25686 324 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 YWHAZP63104 245 aaKnown RBP10.99□□□□□ -0.65
TPM3-212ENST00000368533 BNIP1Q12981 228 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 DNAJC3Q13217 504 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 DCLRE1AQ6PJP8 1040 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 OTOP2Q7RTS6 562 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 SPATA2LQ8IUW3 424 aaPredicted RBP10.99□□□□□ -0.65
TPM3-212ENST00000368533 SPATA18Q8TC71 538 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 FBF1Q8TES7 1133 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 BCL7CQ8WUZ0 217 aaPredicted RBP10.99□□□□□ -0.65
TPM3-212ENST00000368533 CKAP2Q8WWK9 683 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 RSAD2Q8WXG1 361 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 NUDCD1Q96RS6 583 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 MMADHCQ9H3L0 296 aaPredicted RBP10.99□□□□□ -0.65
TPM3-212ENST00000368533 ANLNQ9NQW6 1124 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 SFMBT1Q9UHJ3 866 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 CDH9Q9ULB4 789 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 OGDHLQ9ULD0 1010 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 WDR91A4D1P6 747 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 MDM4O15151 490 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 CPB1P15086 417 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 GNAZP19086 355 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 AMPD1P23109 780 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 PTDSS1P48651 473 aaKnown RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 TSPY1Q01534 308 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 DPYSL3Q14195 570 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 SMAD1Q15797 465 aaKnown RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 LRRC26Q2I0M4 334 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 VARS2Q5ST30 1063 aaKnown RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 RSPO2Q6UXX9 243 aaPredicted RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 PPP1R21Q6ZMI0 780 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 LIMS2Q7Z4I7 341 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 UNC45BQ8IWX7 931 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 ZCCHC9Q8N567 271 aaKnown RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 NIPA2Q8N8Q9 360 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 AUTS2Q8WXX7 1259 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 RNF34Q969K3 372 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 SMC6Q96SB8 1091 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 TRABDQ9H4I3 376 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 PIGVQ9NUD9 493 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 DDIT4Q9NX09 232 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 AP4E1Q9UPM8 1137 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 ARL2BPQ9Y2Y0 163 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 USH1CQ9Y6N9 552 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 FAM47DPA6NHR8 397 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 H7C0C1 242 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 DNALI1O14645 258 aaPredicted RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 MOCS2O96007 188 aaPredicted RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 FYNP06241 537 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 SPATA31D3P0C874 917 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 TARSP26639 723 aaKnown RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 ATP5OP48047 213 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 SERPINB4P48594 390 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 DEFB103AP81534 67 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 PKN2Q16513 984 aaKnown RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 CTXN3Q4LDR2 81 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 TNFAIP8L3Q5GJ75 292 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 RTP2Q5QGT7 225 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 SPATA31D4Q6ZUB0 917 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 CENPUQ71F23 418 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 VSIG1Q86XK7 387 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 TMEM86AQ8N2M4 240 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 SMARCD1Q96GM5 515 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 CASD1Q96PB1 797 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 PLEKHG4BQ96PX9 1271 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 SEPT5Q99719 369 aaPredicted RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 SIK2Q9H0K1 926 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 CCDC134Q9H6E4 229 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 TMEM161AQ9NX61 479 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 MAGED2Q9UNF1 606 aaPredicted RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 REV3LO60673 3130 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 PEX11AO75192 247 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 EOMESO95936 686 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 KLRC2P26717 231 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 PRMT2P55345 433 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 MRPS35P82673 323 aaKnown RBP10.98□□□□□ -0.65
TPM3-212ENST00000368533 GBE1Q04446 702 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 MGAT5Q09328 741 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 RCN2Q14257 317 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 MUM1Q2TAK8 710 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 BBS9Q3SYG4 887 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 GALNTL6Q49A17 601 aa10.98□□□□□ -0.65
TPM3-212ENST00000368533 ZNF449Q6P9G9 518 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms