RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 SRGAP2BP0DMP2 458 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 RAG1P15918 1043 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 ARF4P18085 180 aaPredicted RBP9.13□□□□□ -0.95
THBS3-201ENST00000368378 RPS12P25398 132 aaKnown RBP9.13□□□□□ -0.95
THBS3-201ENST00000368378 ETV4P43268 484 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 MRPS35P82673 323 aaKnown RBP9.13□□□□□ -0.95
THBS3-201ENST00000368378 TAP1Q03518 808 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 TFDP2Q14188 446 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 NOMO1Q15155 1222 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.13□□□□□ -0.95
THBS3-201ENST00000368378 WASHC2DQ5SRD0 308 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 PPP1R2P3Q6NXS1 205 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 ZPBP2Q6X784 338 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 ATG14Q6ZNE5 492 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 ZNF354CQ86Y25 554 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 PLD6Q8N2A8 252 aaKnown RBP9.13□□□□□ -0.95
THBS3-201ENST00000368378 MCUQ8NE86 351 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 MZB1Q8WU39 189 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 LENG1Q96BZ8 264 aaPredicted RBP9.13□□□□□ -0.95
THBS3-201ENST00000368378 NIFKQ9BYG3 293 aaKnown RBP9.13□□□□□ -0.95
THBS3-201ENST00000368378 NUF2Q9BZD4 464 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 POPDC2Q9HBU9 364 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 CYP4F12Q9HCS2 524 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 DPP3Q9NY33 737 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
THBS3-201ENST00000368378 SLC39A10Q9ULF5 831 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 PCDHGB4Q9UN71 923 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 AP4E1Q9UPM8 1137 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 LRRC42Q9Y546 428 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 PCDHGB5Q9Y5G0 923 aa9.13□□□□□ -0.95
THBS3-201ENST00000368378 PHIPQ8WWQ0 1821 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 RNASEH1O60930 286 aaKnown RBP9.12□□□□□ -0.95
THBS3-201ENST00000368378 MAFO75444 373 aaPredicted RBP9.12□□□□□ -0.95
THBS3-201ENST00000368378 CSPG5O95196 566 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 PARNO95453 639 aaKnown RBP9.12□□□□□ -0.95
THBS3-201ENST00000368378 CHRNGP07510 517 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 FAM200BP0CF97 657 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 HDCP19113 662 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 EFNA5P52803 228 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 AP2B1P63010 937 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 CACNB2Q08289 660 aaPredicted RBP9.12□□□□□ -0.95
THBS3-201ENST00000368378 DLG1Q12959 904 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 GK3PQ14409 553 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 SOWAHAQ2M3V2 549 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 MMEL1Q495T6 779 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 FBXO48Q5FWF7 155 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 SPDYAQ5MJ70 313 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 ARHGAP24Q8N264 748 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 ACVR1CQ8NER5 493 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 EDEM1Q92611 657 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 MFSD3Q96ES6 412 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 CNPY3Q9BT09 278 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 NT5C1AQ9BXI3 368 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 ZNF518BQ9C0D4 1074 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 USP29Q9HBJ7 922 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 TXNRD2Q9NNW7 524 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 CYLDQ9NQC7 956 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 SYBUQ9NX95 663 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 PAK5Q9P286 719 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 HBS1LQ9Y450 684 aaKnown RBP9.12□□□□□ -0.95
THBS3-201ENST00000368378 UNC80Q8N2C7 3258 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 SLC4A1P02730 911 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 ZNF143P52747 638 aaPredicted RBP9.12□□□□□ -0.95
THBS3-201ENST00000368378 DSG1Q02413 1049 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 POU5F1BQ06416 359 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 VGLL4Q14135 290 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 NRF1Q16656 503 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 SLC10A6Q3KNW5 377 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 SFT2D3Q587I9 215 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 ZNF781Q8N8C0 355 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 RNF34Q969K3 372 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 CATSPER2Q96P56 530 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 OSMRQ99650 979 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 MED10Q9BTT4 135 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 IL1RL2Q9HB29 575 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 ARHGEF4Q9NR80 690 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 SUN2Q9UH99 717 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 TAGLN3Q9UI15 199 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 LRCH1Q9Y2L9 728 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 MGAMO43451 1857 aa9.12□□□□□ -0.95
THBS3-201ENST00000368378 HMX2A2RU54 273 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 TMEM233B4DJY2 109 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 ATG7O95352 703 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 IL4RP24394 825 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 STIP1P31948 543 aaKnown RBP9.11□□□□□ -0.95
THBS3-201ENST00000368378 OAZ1P54368 228 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 ENPEPQ07075 957 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 CDC16Q13042 620 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 PDE1CQ14123 709 aaPredicted RBP9.11□□□□□ -0.95
THBS3-201ENST00000368378 KCNJ11Q14654 390 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 TARBP2Q15633 366 aaKnown RBP9.11□□□□□ -0.95
THBS3-201ENST00000368378 CDCA2Q69YH5 1023 aaPredicted RBP9.11□□□□□ -0.95
THBS3-201ENST00000368378 FRMD7Q6ZUT3 714 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 TMPRSS6Q8IU80 811 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 DRAXINQ8NBI3 349 aaPredicted RBP9.11□□□□□ -0.95
THBS3-201ENST00000368378 ZNF784Q8NCA9 323 aaPredicted RBP9.11□□□□□ -0.95
THBS3-201ENST00000368378 SLC2A14Q8TDB8 520 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 HASPINQ8TF76 798 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 AFG1LQ8WV93 481 aa9.11□□□□□ -0.95
THBS3-201ENST00000368378 YIPF2Q9BWQ6 316 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms