RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 ZDHHC11BP0C7U3 371 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 HOXC13P31276 330 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 ARPP19P56211 112 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 DUSP4Q13115 394 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 RAB33AQ14088 237 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 STAT4Q14765 748 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 HIF1AQ16665 826 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 RNF19BQ6ZMZ0 732 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 VPS52Q8N1B4 723 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 NAT8LQ8N9F0 302 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 COLGALT1Q8NBJ5 622 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 STKLD1Q8NE28 680 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 HTR3CQ8WXA8 447 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 LRRC39Q96DD0 335 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 SEPT5Q99719 369 aaPredicted RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 MTIF3Q9H2K0 278 aaKnown RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 ACTR5Q9H9F9 607 aaPredicted RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 UXTQ9UBK9 157 aaPredicted RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 RWDD3Q9Y3V2 267 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 INSL6Q9Y581 213 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 VWA8A3KMH1 1905 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 AP3B1O00203 1094 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 ERCC2P18074 760 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 RBL1P28749 1068 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 ELF1P32519 619 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 OR1D2P34982 312 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 PHBP35232 272 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 ALDH1A3P47895 512 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 TUBP50607 506 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 ATP1A2P50993 1020 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 PITX1P78337 314 aaPredicted RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 FPGSQ05932 587 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 SLC29A2Q14542 456 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 VEPH1Q14D04 833 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 KRT71Q3SY84 523 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 RTL10Q7L3V2 364 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 RIBC1Q8N443 379 aaPredicted RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 MCUQ8NE86 351 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 ZNF473Q8WTR7 871 aaKnown RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 PRCCQ92733 491 aaPredicted RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 BADQ92934 168 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 PGM2Q96G03 612 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 PGLYRP2Q96PD5 576 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 CCT8L2Q96SF2 557 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 CDC42EP4Q9H3Q1 356 aaKnown RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 SEMA4AQ9H3S1 761 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 MRPL17Q9NRX2 175 aaKnown RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.7□□□□□ -0.22
NFIX-201ENST00000358552 PPARGC1AQ9UBK2 798 aaKnown RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 TRHDEQ9UKU6 1024 aa13.7□□□□□ -0.22
NFIX-201ENST00000358552 HBS1LQ9Y450 684 aaKnown RBP13.7□□□□□ -0.22
NFIX-201ENST00000358552 GOLGA6L7A0A1B0GV03 622 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 WASH4PA8MWX3 477 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 C1RP00736 705 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 TPSB2P20231 275 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 EPHB2P29323 1055 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 MAGEA4P43358 317 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 MLLT6P55198 1093 aaPredicted RBP13.69□□□□□ -0.22
NFIX-201ENST00000358552 TBX4P57082 545 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 GBE1Q04446 702 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 IFRD2Q12894 506 aaPredicted RBP13.69□□□□□ -0.22
NFIX-201ENST00000358552 TRIP4Q15650 581 aaPredicted RBP13.69□□□□□ -0.22
NFIX-201ENST00000358552 TPSAB1Q15661 275 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 NUGGCQ68CJ6 796 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 NPNTQ6UXI9 565 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 C16orf59Q7L2K0 433 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 SH2D3CQ8N5H7 860 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 ADAM32Q8TC27 787 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 CPT1BQ92523 772 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 HDAC11Q96DB2 347 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 TBC1D31Q96DN5 1066 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 TRMT2BQ96GJ1 504 aaKnown RBP13.69□□□□□ -0.22
NFIX-201ENST00000358552 SLC39A13Q96H72 371 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 BTN2A3PQ96KV6 586 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 MYRFLQ96LU7 910 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 SERPINB12Q96P63 405 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 CENPHQ9H3R5 247 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 FETUBQ9UGM5 382 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 ASB3Q9Y575 518 aa13.69□□□□□ -0.22
NFIX-201ENST00000358552 A0A0A0MRY4 1105 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 WDR27A2RRH5 827 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 SLC38A8A6NNN8 435 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 ERI2A8K979 691 aaKnown RBP13.68□□□□□ -0.22
NFIX-201ENST00000358552 E7ESA3 106 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 LRIG2O94898 1065 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 FSBPO95073 299 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 GJB5O95377 273 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 GSTA2P09210 222 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 ZSCAN5DPP0CG00 497 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 ACRP10323 421 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 GDF10P55107 478 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 BASP1P80723 227 aaKnown RBP13.68□□□□□ -0.22
NFIX-201ENST00000358552 HTRA4P83105 476 aaPredicted RBP13.68□□□□□ -0.22
NFIX-201ENST00000358552 PPIDQ08752 370 aaKnown RBP13.68□□□□□ -0.22
NFIX-201ENST00000358552 TAF10Q12962 218 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 PRKD1Q15139 912 aaPredicted RBP13.68□□□□□ -0.22
NFIX-201ENST00000358552 ARHGEF18Q6ZSZ5 1173 aa13.68□□□□□ -0.22
NFIX-201ENST00000358552 ITIH5Q86UX2 942 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms