RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CCDC106Q9BWC9 280 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 MRPL4Q9BYD3 311 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 DEFB129Q9H1M3 183 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 POPDC2Q9HBU9 364 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 ATAD3AQ9NVI7 634 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZDHHC7Q9NXF8 308 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 TXNDC16Q9P2K2 825 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 RABL2BQ9UNT1 228 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PLA2G4CQ9UP65 541 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 RBBP6Q7Z6E9 1792 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 A0A088AWK7 358 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLC15A5A6NIM6 579 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 APOL1O14791 398 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 CFLARO15519 480 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 B4GALT5O43286 388 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 TBC1D12O60347 775 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 ADAM23O75077 832 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 SPAG6O75602 509 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 MICAL2O94851 1124 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 ITGB3P05106 788 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 ABCG1P45844 678 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLC1A6P48664 564 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 RAB15P59190 212 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 CNTN2Q02246 1040 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 PPP2R5DQ14738 602 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 PPM1JQ5JR12 505 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 DEPDC1Q5TB30 811 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 CAND1Q86VP6 1230 aaKnown RBP8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 TNS4Q8IZW8 715 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 CMASQ8NFW8 434 aaPredicted RBP8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 RIN3Q8TB24 985 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 MAGEB5Q9BZ81 275 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 PDGFDQ9GZP0 370 aaPredicted RBP8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 S100A14Q9HCY8 104 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 THAP1Q9NVV9 213 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 SEPT10Q9P0V9 454 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 DKK3Q9UBP4 350 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 ADAMTS6Q9UKP5 1117 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 STYXL1Q9Y6J8 313 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLX4Q8IY92 1834 aa8.46□□□□□ -1.05
CDC42SE1-201ENST00000357235 SYNJ2BP-COX16A0A087WUM0 186 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 C15orf38-AP3S2A0A0A6YYH1 394 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 GOLGA8QA0A0J9YX86 632 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 WDR27A2RRH5 827 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 GOLGA8OA6NCC3 632 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 CAPN8A6NHC0 703 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 GOLGA8NF8WBI6 632 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 GOLGA8TH3BQL2 631 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 NEMP1O14524 444 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 CHADO15335 359 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 SIN3BO75182 1162 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 DGKIO75912 1065 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 METTL18O95568 372 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 PRKCBP05771 671 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 SAT1P21673 171 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 ADORA2AP29274 412 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 SLC5A2P31639 672 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 TCF7P36402 384 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 BTKQ06187 659 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 ARPINQ7Z6K5 226 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 HACE1Q8IYU2 909 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 ADGRF2Q8IZF7 708 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 PLD5Q8N7P1 536 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 C12orf29Q8N999 325 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 TRAPPC12Q8WVT3 735 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 ATP2A3Q93084 1043 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 MOCOSQ96EN8 888 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 ZFRQ96KR1 1074 aaKnown RBP8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 GRIP2Q9C0E4 1043 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 RNPEPQ9H4A4 650 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 DHX33Q9H6R0 707 aaKnown RBP8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 ZNF358Q9NW07 568 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 COX16Q9P0S2 106 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 SIRPGQ9P1W8 387 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 CARD8Q9Y2G2 431 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 COQ6Q9Y2Z9 468 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 FUOMA2VDF0 154 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 IQCA1LA6NCM1 817 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 TPP1O14773 563 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 AIM2O14862 343 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 KLF11O14901 512 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 OGTO15294 1046 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 TRPA1O75762 1119 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 EGFRP00533 1210 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 CYP2C9P11712 490 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 GPD1P21695 349 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 EIF2B2P49770 351 aaKnown RBP8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 GTF2A2P52657 109 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 PTPN11Q06124 597 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 CA9Q16790 459 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 ZNF423Q2M1K9 1284 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 ANKRD20A4Q4UJ75 823 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 TEX44Q53QW1 395 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 C10orf107Q8IVU9 208 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 SLC7A5P1Q8MH63 180 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 ICA1LQ8NDH6 482 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 GSDMBQ8TAX9 411 aa8.46□□□□□ -1.06
CDC42SE1-201ENST00000357235 CDHR1Q96JP9 859 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms