RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 STK10O94804 968 aaKnown RBP14.3□□□□□ -0.12
TRIM4-201ENST00000349062 TARSP26639 723 aaKnown RBP14.3□□□□□ -0.12
TRIM4-201ENST00000349062 PDE1BQ01064 536 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 KCNJ11Q14654 390 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 FITM2Q8N6M3 262 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 SLC27A5Q9Y2P5 690 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.3□□□□□ -0.12
TRIM4-201ENST00000349062 I6L893 689 aaPredicted RBP14.3□□□□□ -0.12
TRIM4-201ENST00000349062 ITKQ08881 620 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 SREBF2Q12772 1141 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 RFX8Q6ZV50 586 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 NDUFAF2Q8N183 169 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 OR10T2Q8NGX3 314 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 CENPTQ96BT3 561 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 FAM193BQ96PV7 902 aaPredicted RBP14.3□□□□□ -0.12
TRIM4-201ENST00000349062 SPATS2LQ9NUQ6 558 aaKnown RBP14.3□□□□□ -0.12
TRIM4-201ENST00000349062 MPP6Q9NZW5 540 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 OR12D3Q9UGF7 316 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 FZD10Q9ULW2 581 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 IQANK1A0A1B0GTG1 560 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 CFAP73A6NFT4 308 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 SEPT4O43236 478 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 DPYSL2Q16555 572 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 SLC9A4Q6AI14 798 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 CDHR3Q6ZTQ4 885 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 TOP6BLQ8N6T0 577 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 SPDYE1Q8NFV5 336 aaPredicted RBP14.3□□□□□ -0.12
TRIM4-201ENST00000349062 DCAKDQ8WVC6 231 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 PTPRN2Q92932 1015 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 MAGEB18Q96M61 343 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 FOXP3Q9BZS1 431 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 GPBP1L1Q9HC44 474 aaPredicted RBP14.3□□□□□ -0.12
TRIM4-201ENST00000349062 SLC12A4Q9UP95 1085 aa14.3□□□□□ -0.12
TRIM4-201ENST00000349062 C9IYK1 514 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 C2CD2LO14523 706 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 STAU1O95793 577 aaKnown RBP14.29□□□□□ -0.12
TRIM4-201ENST00000349062 FYNP06241 537 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 CYBAP13498 195 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 CALRP27797 417 aaKnown RBP14.29□□□□□ -0.12
TRIM4-201ENST00000349062 ADRA1BP35368 520 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 PTPN9P43378 593 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 GJA9P57773 515 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 ITIH4Q14624 930 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 LPIN1Q14693 890 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 PCSK7Q16549 785 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 SPATA2LQ8IUW3 424 aaPredicted RBP14.29□□□□□ -0.12
TRIM4-201ENST00000349062 ZNF75CPQ92670 426 aaPredicted RBP14.29□□□□□ -0.12
TRIM4-201ENST00000349062 SENP6Q9GZR1 1112 aaPredicted RBP14.29□□□□□ -0.12
TRIM4-201ENST00000349062 VPS11Q9H270 941 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 DNAJB4Q9UDY4 337 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 LGALS13Q9UHV8 139 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 TTC24A2A3L6 582 aaPredicted RBP14.29□□□□□ -0.12
TRIM4-201ENST00000349062 CA12O43570 354 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 B4GALT3O60512 393 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 SLC10A3P09131 477 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 DAOAP59103 153 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 ARHGAP36Q6ZRI8 547 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 ATAD1Q8NBU5 361 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 TEX264Q9Y6I9 313 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 RPS6KL1Q9Y6S9 549 aa14.29□□□□□ -0.12
TRIM4-201ENST00000349062 ENDOD1O94919 500 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 TBX18O95935 607 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 ABHD2P08910 425 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 ODC1P11926 461 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 WARSP23381 471 aaKnown RBP14.28□□□□□ -0.12
TRIM4-201ENST00000349062 CA8P35219 290 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 BTBD8Q5XKL5 378 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 CGB2Q6NT52 195 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 LONP2Q86WA8 852 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 ZNF567Q8N184 647 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 NPWQ8N729 165 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 PPP1R36Q96LQ0 422 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 FERMT1Q9BQL6 677 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 OSBPL1AQ9BXW6 950 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 HAO1Q9UJM8 370 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 SMIM24O75264 130 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 CBX6O95503 412 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 ASMTLO95671 621 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 PCSK1P29120 753 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 LHX1P48742 406 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 TMPRSS15P98073 1019 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 TAZQ16635 292 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 TNFAIP8L3Q5GJ75 292 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 OTOP3Q7RTS5 596 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 TAC4Q86UU9 113 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 SERINC5Q86VE9 423 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 ZDHHC17Q8IUH5 632 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 ABI1Q8IZP0 508 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 TTC9BQ8N6N2 239 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 TEKT4Q8WW24 435 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 ZNF669Q96BR6 464 aaPredicted RBP14.28□□□□□ -0.12
TRIM4-201ENST00000349062 SYBUQ9NX95 663 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 ARL2BPQ9Y2Y0 163 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 DPYSL4O14531 572 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 TSPY1Q01534 308 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 PPM1JQ5JR12 505 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 OTUD1Q5VV17 481 aaPredicted RBP14.28□□□□□ -0.12
TRIM4-201ENST00000349062 ECHDC2Q86YB7 292 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 SPATA22Q8NHS9 363 aa14.28□□□□□ -0.12
TRIM4-201ENST00000349062 MOCOSQ96EN8 888 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms