RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TMEM121Q9BTD3 319 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 SYTL2Q9HCH5 934 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 OR12D3Q9UGF7 316 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 STRCQ7RTU9 1775 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 RASSF10A6NK89 507 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 NEDD8-MDP1E9PL57 170 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 IFRD1O00458 451 aaPredicted RBP16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 TGFB1I1O43294 461 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 MSH3P20585 1137 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 RFC2P35250 354 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 FOXD4Q12950 439 aaPredicted RBP16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 SPDYE7PQ495Y7 208 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 SLC45A4Q5BKX6 768 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 PKN3Q6P5Z2 889 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 LRRC49Q8IUZ0 686 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 REXO1L1PQ8IX06 675 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 LZICQ8WZA0 190 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 TEX12Q9BXU0 123 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 PCDH9Q9HC56 1237 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 SIK3Q9Y2K2 1263 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 PCDHA3Q9Y5H8 950 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 CLASP2O75122 1294 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 EN2P19622 333 aaPredicted RBP16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 POU4F1Q01851 419 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 RIC8BQ9NVN3 520 aa16.81■□□□□ 0.28
SMARCA4-201ENST00000344626 SESN3P58005 492 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 ACOX1Q15067 660 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 ARMC12Q5T9G4 340 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 FAM183BPQ6ZVS7 135 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 LRRC6Q86X45 466 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 SHC3Q92529 594 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 MS4A4AQ96JQ5 239 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 POLR1EQ9GZS1 481 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 ZDHHC6Q9H6R6 413 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 XPNPEP1Q9NQW7 623 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 CHUKO15111 745 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 KRT4P19013 534 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 FBXW4P57775 412 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 SNRPD1P62314 119 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.8■□□□□ 0.281e-5■■□□□ 13.3
SMARCA4-201ENST00000344626 TEKT4Q8WW24 435 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 MRPL45Q9BRJ2 306 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 VIPAS39Q9H9C1 493 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 ACP6Q9NPH0 428 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 PSD3Q9NYI0 1048 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 DCTN4Q9UJW0 460 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 GMNCA6NCL1 334 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 KCNA5P22460 613 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 MZF1P28698 734 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 MMP13P45452 471 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 CAMK2GQ13555 558 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 MTBPQ96DY7 904 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 THOC1Q96FV9 657 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 DUSP10Q9Y6W6 482 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 ALS2Q96Q42 1657 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 MEI4A8MW99 385 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 EIF3HO15372 352 aaKnown RBP eCLIP16.8■□□□□ 0.281e-6■□□□□ 8.3
SMARCA4-201ENST00000344626 GLI1P08151 1106 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 FOSL2P15408 326 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 TTC7BQ86TV6 843 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 CPA6Q8N4T0 437 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 CCDC126Q96EE4 140 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 ADAM33Q9BZ11 813 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 FAM153AQ9UHL3 310 aa16.8■□□□□ 0.28
SMARCA4-201ENST00000344626 C1QTNF3-AMACRE9PGA6 284 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 PYGBP11216 843 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 NPY2RP49146 381 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 DOK6Q6PKX4 331 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 POF1BQ8WVV4 589 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 KAT2BQ92831 832 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 ZYG11BQ9C0D3 744 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 EVA1BQ9NVM1 165 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 UTP6Q9NYH9 597 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 SPACA6W5XKT8 324 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 SLC8A1P32418 973 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 SERPINB8P50452 374 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 APODP05090 189 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 CNTFP26441 200 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 TKTP29401 623 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 MRPS5P82675 430 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 LRRC14Q15048 493 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 TEDDM1Q5T9Z0 273 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 USP45Q70EL2 814 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 FBXO36Q8NEA4 188 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 PIK3R5Q8WYR1 880 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 CEP41Q9BYV8 373 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 A0A0U1RQF3 1178 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 DAB1O75553 588 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 NFATC1O95644 943 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 BEND6Q5SZJ8 279 aaPredicted RBP16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 PAPD7Q5XG87 772 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 LRRC37BQ96QE4 947 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 TBC1D14Q9P2M4 693 aa16.79■□□□□ 0.28
SMARCA4-201ENST00000344626 ZSCAN5CA6NGD5 496 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 GYG2O15488 501 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 GJB6O95452 261 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 GRK3P35626 688 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 MARSP56192 900 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 ZBTB41Q5SVQ8 909 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 AGBL2Q5U5Z8 902 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms