RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 LRIG2O94898 1065 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 IGFBP4P22692 258 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 RPL21P46778 160 aaKnown RBP17.9■□□□□ 0.46
CLDN4-201ENST00000340958 DRG2P55039 364 aaKnown RBP17.9■□□□□ 0.46
CLDN4-201ENST00000340958 PLTPP55058 493 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 DPYSQ14117 519 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 BEND6Q5SZJ8 279 aaPredicted RBP17.9■□□□□ 0.46
CLDN4-201ENST00000340958 EMBQ6PCB8 327 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 LRRC31Q6UY01 552 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 CDKL3Q8IVW4 592 aaPredicted RBP17.9■□□□□ 0.46
CLDN4-201ENST00000340958 CCDC33Q8N5R6 958 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 FAM71DQ8N9W8 422 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.9■□□□□ 0.46
CLDN4-201ENST00000340958 SEC14L1Q92503 715 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 SNF8Q96H20 258 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 FERMT1Q9BQL6 677 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 TRPC7Q9HCX4 862 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 ETNK2Q9NVF9 386 aa17.9■□□□□ 0.46
CLDN4-201ENST00000340958 SPTBN5Q9NRC6 3674 aaKnown RBP17.9■□□□□ 0.46
CLDN4-201ENST00000340958 STIP1P31948 543 aaKnown RBP17.89■□□□□ 0.45
CLDN4-201ENST00000340958 SNX30Q5VWJ9 437 aa17.89■□□□□ 0.45
CLDN4-201ENST00000340958 LILRA6Q6PI73 481 aa17.89■□□□□ 0.45
CLDN4-201ENST00000340958 PRUNE1Q86TP1 453 aa17.89■□□□□ 0.45
CLDN4-201ENST00000340958 EIF1ADQ8N9N8 165 aaKnown RBP17.89■□□□□ 0.45
CLDN4-201ENST00000340958 BBOF1Q8ND07 529 aa17.89■□□□□ 0.45
CLDN4-201ENST00000340958 TBC1D31Q96DN5 1066 aa17.89■□□□□ 0.45
CLDN4-201ENST00000340958 BTN2A3PQ96KV6 586 aa17.89■□□□□ 0.45
CLDN4-201ENST00000340958 GCNAQ96QF7 691 aa17.89■□□□□ 0.45
CLDN4-201ENST00000340958 MTRF1LQ9UGC7 380 aaKnown RBP17.89■□□□□ 0.45
CLDN4-201ENST00000340958 KCNN4O15554 427 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 COCHO43405 550 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 ZSCAN5DPP0CG00 497 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 SERPINB6P35237 376 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 HARS2P49590 506 aaKnown RBP17.88■□□□□ 0.45
CLDN4-201ENST00000340958 GPS1Q13098 491 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 SEMA3BQ13214 749 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 NUGGCQ68CJ6 796 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 HDXQ7Z353 690 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 UNC45BQ8IWX7 931 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 CCNYQ8ND76 341 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 AENQ8WTP8 325 aaKnown RBP17.88■□□□□ 0.45
CLDN4-201ENST00000340958 LRRC45Q96CN5 670 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 SLC39A13Q96H72 371 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 CATSPERBQ9H7T0 1116 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 XPO7Q9UIA9 1087 aaKnown RBP17.88■□□□□ 0.45
CLDN4-201ENST00000340958 HBS1LQ9Y450 684 aaKnown RBP17.88■□□□□ 0.45
CLDN4-201ENST00000340958 MFHAS1Q9Y4C4 1052 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 HS3ST4Q9Y661 456 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 MYO7AQ13402 2215 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 ZNF638Q14966 1978 aaKnown RBP17.88■□□□□ 0.45
CLDN4-201ENST00000340958 CFAP69A5D8W1 941 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 H3BNC9 293 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 MFSD11O43934 449 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 ETS1P14921 441 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 ITIH2P19823 946 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 HTR7P34969 479 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 IRS1P35568 1242 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 TUBP50607 506 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 CLCN4P51793 760 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 COG7P83436 770 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 MTA1Q13330 715 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 XRCC4Q13426 336 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 P3H1Q32P28 736 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 TFB1MQ8WVM0 346 aaKnown RBP17.88■□□□□ 0.45
CLDN4-201ENST00000340958 FMO2Q99518 471 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 PCDH9Q9HC56 1237 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 DTLQ9NZJ0 730 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 WHRNQ9P202 907 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 ANAPC5Q9UJX4 755 aa17.88■□□□□ 0.45
CLDN4-201ENST00000340958 E9PAM4 449 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 PPP1R12AO14974 1030 aaPredicted RBP17.87■□□□□ 0.45
CLDN4-201ENST00000340958 DCLK1O15075 740 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 CCL16O15467 120 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 FGF10O15520 208 aaPredicted RBP17.87■□□□□ 0.45
CLDN4-201ENST00000340958 MBL2P11226 248 aaPredicted RBP17.87■□□□□ 0.45
CLDN4-201ENST00000340958 GABRR2P28476 465 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 GDF10P55107 478 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 MLLT6P55198 1093 aaPredicted RBP17.87■□□□□ 0.45
CLDN4-201ENST00000340958 RING1Q06587 406 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 AP1B1Q10567 949 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 SLC10A2Q12908 348 aaPredicted RBP17.87■□□□□ 0.45
CLDN4-201ENST00000340958 PDK1Q15118 436 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 IZUMO3Q5VZ72 239 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 PDE12Q6L8Q7 609 aaKnown RBP17.87■□□□□ 0.45
CLDN4-201ENST00000340958 KLHDC10Q6PID8 442 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 ZNF276Q8N554 614 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 LRRN4Q8WUT4 740 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 C1orf74Q96LT6 269 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 CORO1BQ9BR76 489 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 ZNF334Q9HCZ1 680 aaPredicted RBP17.87■□□□□ 0.45
CLDN4-201ENST00000340958 MTCH2Q9Y6C9 303 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 GREB1Q4ZG55 1949 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 UNC80Q8N2C7 3258 aa17.87■□□□□ 0.45
CLDN4-201ENST00000340958 C2orf78A6NCI8 922 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 BHMG1C9JSJ3 638 aaPredicted RBP17.86■□□□□ 0.45
CLDN4-201ENST00000340958 RBL1P28749 1068 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 PAFAH1B3Q15102 231 aaKnown RBP17.86■□□□□ 0.45
CLDN4-201ENST00000340958 SLC45A4Q5BKX6 768 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 HEATR6Q6AI08 1181 aaKnown RBP17.86■□□□□ 0.45
CLDN4-201ENST00000340958 RBM23Q86U06 439 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms