RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PAN2Q504Q3 1202 aaKnown RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 ARMC12Q5T9G4 340 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 SYTL5Q8TDW5 730 aaPredicted RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 A0A1W2PQ67 120 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 EIF4BP23588 611 aaKnown RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 CD151P48509 253 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 MSLNQ13421 630 aaPredicted RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 GALNTL6Q49A17 601 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 KYAT3Q6YP21 454 aaKnown RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 FBXO10Q9UK96 956 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 LAMB4A4D0S4 1761 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 PIPSLA2A3N6 862 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 PIK3CDO00329 1044 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 CCNDBP1O95273 360 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 ZNHIT3Q15649 155 aaPredicted RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 GALNT18Q6P9A2 607 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 FBXL19Q6PCT2 694 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 WDR48Q8TAF3 677 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 ASCC2Q9H1I8 757 aaPredicted RBP12.54□□□□□ -0.4
FN1-202ENST00000336916 TMEM216Q9P0N5 145 aa12.54□□□□□ -0.4
FN1-202ENST00000336916 RGS14O43566 566 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 TTPAP49638 278 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 PSMD7P51665 324 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 FAM98BQ52LJ0 330 aaKnown RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 INTS11Q5TA45 600 aaKnown RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 SLC26A11Q86WA9 606 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 CCT7Q99832 543 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 APOL4Q9BPW4 351 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 RUSC1Q9BVN2 902 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 UGT2B28Q9BY64 529 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 TRIT1Q9H3H1 467 aaKnown RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 CNTNAP2Q9UHC6 1331 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 TRIM49D1C9J1S8 452 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 H3BQF6 201 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 INSRRP14616 1297 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 AGMOQ6ZNB7 445 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 OR56A4Q8NGH8 313 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 SEC16BQ96JE7 1060 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 ZNF558Q96NG5 402 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 EPB41L4AQ9HCS5 686 aaPredicted RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 KCTD5Q9NXV2 234 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 ESYT3A0FGR9 886 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 UBE2Q2LH0YL09 131 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 CLCN3P51790 818 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 PMS1P54277 932 aaKnown RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 AIF1P55008 147 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 CBWD3Q5JTY5 395 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 CBWD5Q5RIA9 395 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 NEK10Q6ZWH5 1172 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 ANKRD49Q8WVL7 239 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 ACSF2Q96CM8 615 aaPredicted RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 PACSIN1Q9BY11 444 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 TTC33Q6PID6 262 aaPredicted RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 XRN1Q8IZH2 1706 aaKnown RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 FAM45AQ8TCE6 357 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 SLC5A5Q92911 643 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 GPAMQ9HCL2 828 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 ASTN2O75129 1339 aaPredicted RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 HIST1H2ABP04908 130 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 GSTM1P09488 218 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 PSMC3P17980 439 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 MYL12AP19105 171 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 NUDT2P50583 147 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 ARMCX4Q5H9R4 360 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 HIST3H2AQ7L7L0 130 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 CAMKK1Q8N5S9 505 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 RFWD2Q8NHY2 731 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 ZFP28Q8NHY6 868 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 HIST1H2ACQ93077 130 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 RBM22Q9NW64 420 aaKnown RBP eCLIP12.53□□□□□ -0.46e-8■■■□□ 18.3
FN1-202ENST00000336916 CCT8L1PA6NM43 557 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 STAU1O95793 577 aaKnown RBP12.53□□□□□ -0.4
FN1-202ENST00000336916 S100GP29377 79 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 SLC29A2Q14542 456 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 AMHR2Q16671 573 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 EPB41L4BQ9H329 900 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 POPDC2Q9HBU9 364 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 PCM1Q15154 2024 aa12.53□□□□□ -0.4
FN1-202ENST00000336916 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.52□□□□□ -0.4
FN1-202ENST00000336916 ENO2P09104 434 aaPredicted RBP12.52□□□□□ -0.4
FN1-202ENST00000336916 ITGAXP20702 1163 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 CYP2A13Q16696 494 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 OLFML2BQ68BL8 750 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 USP7Q93009 1102 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 CPB2Q96IY4 423 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 SPACA7Q96KW9 195 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 BBS4Q96RK4 519 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 CATSPERZQ9NTU4 200 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 FER1L6Q2WGJ9 1857 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 PNMA8CA0A1B0GUJ8 204 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 LRRC14Q15048 493 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 TRMT5Q32P41 509 aaKnown RBP12.52□□□□□ -0.4
FN1-202ENST00000336916 GLRA4Q5JXX5 417 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 SH3BP5LQ7L8J4 393 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 TRMT11Q7Z4G4 463 aaKnown RBP12.52□□□□□ -0.4
FN1-202ENST00000336916 ABRAQ8N0Z2 381 aa12.52□□□□□ -0.4
FN1-202ENST00000336916 RERGQ96A58 199 aaPredicted RBP12.52□□□□□ -0.4
FN1-202ENST00000336916 OSMRQ99650 979 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms