RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 STRADAQ7RTN6 431 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 TFAP2DQ7Z6R9 452 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 MIB1Q86YT6 1006 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 CDKL3Q8IVW4 592 aaPredicted RBP12.96□□□□□ -0.33
LIMK1-201ENST00000336180 OR52K1Q8NGK4 314 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 TTC25Q96NG3 672 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 FAM111AQ96PZ2 611 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 OSER1Q9NX31 292 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 TRIM33Q9UPN9 1127 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 PCSK1P29120 753 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 OTOP3Q7RTS5 596 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 DQX1Q8TE96 717 aaKnown RBP12.96□□□□□ -0.33
LIMK1-201ENST00000336180 CASP10Q92851 521 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 RMDN2Q96LZ7 410 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 KDM4CQ9H3R0 1056 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 TBC1D13Q9NVG8 400 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 DCTN4Q9UJW0 460 aa12.96□□□□□ -0.33
LIMK1-201ENST00000336180 H3BRJ5 948 aa12.96□□□□□ -0.34
LIMK1-201ENST00000336180 JCHAINP01591 159 aa12.96□□□□□ -0.34
LIMK1-201ENST00000336180 PHBP35232 272 aa12.96□□□□□ -0.34
LIMK1-201ENST00000336180 FAM171A1Q5VUB5 890 aa12.96□□□□□ -0.34
LIMK1-201ENST00000336180 CIR1Q86X95 450 aaPredicted RBP12.96□□□□□ -0.34
LIMK1-201ENST00000336180 CCDC63Q8NA47 563 aa12.96□□□□□ -0.34
LIMK1-201ENST00000336180 SMC1BQ8NDV3 1235 aa12.96□□□□□ -0.34
LIMK1-201ENST00000336180 ACSS3Q9H6R3 686 aa12.96□□□□□ -0.34
LIMK1-201ENST00000336180 CHST12Q9NRB3 414 aa12.96□□□□□ -0.34
LIMK1-201ENST00000336180 LGALS13Q9UHV8 139 aa12.96□□□□□ -0.34
LIMK1-201ENST00000336180 A0A1W2PQH9 124 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 BCLAF3A2AJT9 711 aaKnown RBP12.95□□□□□ -0.34
LIMK1-201ENST00000336180 TADA2AO75478 443 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 MT-ND3P03897 115 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 TAC1P20366 129 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 SAT1P21673 171 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 ATP5DP30049 168 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 ZBTB17Q13105 803 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 ZNF354CQ86Y25 554 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 PCSK9Q8NBP7 692 aaKnown RBP12.95□□□□□ -0.34
LIMK1-201ENST00000336180 SPATA22Q8NHS9 363 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 GIPC2Q8TF65 315 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 CKAP2Q8WWK9 683 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 PTPRN2Q92932 1015 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 QKIQ96PU8 341 aaKnown RBP eCLIP12.95□□□□□ -0.34
LIMK1-201ENST00000336180 FAM193BQ96PV7 902 aaPredicted RBP12.95□□□□□ -0.34
LIMK1-201ENST00000336180 GPR62Q9BZJ7 368 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 ZMYND8Q9ULU4 1186 aaPredicted RBP12.95□□□□□ -0.34
LIMK1-201ENST00000336180 PTCH2Q9Y6C5 1203 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 ZBTB24O43167 697 aaPredicted RBP12.95□□□□□ -0.34
LIMK1-201ENST00000336180 ERVK-10P10266 1014 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 WASHC5Q12768 1159 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 C16orf46Q6P387 395 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 TAS1R1Q7RTX1 841 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 KIF2BQ8N4N8 673 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 SLC2A13Q96QE2 648 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 UNKQ9C0B0 810 aaKnown RBP12.95□□□□□ -0.34
LIMK1-201ENST00000336180 PCMTD2Q9NV79 361 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 SYBUQ9NX95 663 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 PSAT1Q9Y617 370 aa12.95□□□□□ -0.34
LIMK1-201ENST00000336180 ABHD2P08910 425 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 TSPY1Q01534 308 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 MRPL10Q7Z7H8 261 aaKnown RBP12.94□□□□□ -0.34
LIMK1-201ENST00000336180 C14orf80Q86SX3 495 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 ATP2A3Q93084 1043 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 SEPT5Q99719 369 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-201ENST00000336180 DMAP1Q9NPF5 467 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-201ENST00000336180 TRIM17Q9Y577 477 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 ZNF236Q9UL36 1845 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 NBNO60934 754 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 GRIK3Q13003 919 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 BTBD8Q5XKL5 378 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 PRSS55Q6UWB4 352 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-201ENST00000336180 TMEM86AQ8N2M4 240 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 DNAAF3Q8N9W5 541 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 ZNF296Q8WUU4 475 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-201ENST00000336180 CYTH2Q99418 400 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 PITPNM3Q9BZ71 974 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 HAUS2Q9NVX0 235 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 RALGAPA2Q2PPJ7 1873 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 CHADO15335 359 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 GBP2P32456 591 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-201ENST00000336180 NOMO2Q5JPE7 1267 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 CERCAMQ5T4B2 595 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 SWT1Q5T5J6 900 aaKnown RBP12.94□□□□□ -0.34
LIMK1-201ENST00000336180 LHX8Q68G74 356 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 RSPO2Q6UXX9 243 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-201ENST00000336180 LRRC6Q86X45 466 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 RELL1Q8IUW5 271 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 ABI1Q8IZP0 508 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 DEFB118Q96PH6 123 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 UNC93B1Q9H1C4 597 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 CRISPLD1Q9H336 500 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 FBXW11Q9UKB1 542 aa12.94□□□□□ -0.34
LIMK1-201ENST00000336180 SHROOM3Q8TF72 1996 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 E7ESA3 106 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 DGKIO75912 1065 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 MT-CYBP00156 380 aaPredicted RBP12.93□□□□□ -0.34
LIMK1-201ENST00000336180 RPL34P49207 117 aaKnown RBP12.93□□□□□ -0.34
LIMK1-201ENST00000336180 MGAT5Q09328 741 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 EFEMP1Q12805 493 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 C6orf89Q6UWU4 347 aa12.93□□□□□ -0.34
LIMK1-201ENST00000336180 ZCCHC23Q6ZST2 131 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms