RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PER2O15055 1255 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 HDCP19113 662 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 HARS2P49590 506 aaKnown RBP9.82□□□□□ -0.84
C11orf54-201ENST00000331239 ZNF844Q08AG5 666 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 ODF2Q5BJF6 829 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 TTC39BQ5VTQ0 682 aaPredicted RBP9.82□□□□□ -0.84
C11orf54-201ENST00000331239 LLGL2Q6P1M3 1020 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 HTR3DQ70Z44 454 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 TMC3Q7Z5M5 1100 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 FAM217AQ8IXS0 508 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 ARFGAP2Q8N6H7 521 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 SHKBP1Q8TBC3 707 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 GPR152Q8TDT2 470 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 MSLNLQ96KJ4 702 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 FCRL2Q96LA5 508 aaPredicted RBP9.82□□□□□ -0.84
C11orf54-201ENST00000331239 ATXN3LQ9H3M9 355 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 PIGVQ9NUD9 493 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 LSM7Q9UK45 103 aaKnown RBP9.82□□□□□ -0.84
C11orf54-201ENST00000331239 NFS1Q9Y697 457 aa9.82□□□□□ -0.84
C11orf54-201ENST00000331239 DENND4AQ7Z401 1863 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 ANKRD65E5RJM6 399 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 SLC9A3R1O14745 358 aaPredicted RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 FGF10O15520 208 aaPredicted RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 COCHO43405 550 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 GLP2RO95838 553 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 HOXC13P31276 330 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 SLC11A2P49281 568 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 GUCY1A3Q02108 690 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 TFDP2Q14188 446 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 SEL1L2Q5TEA6 688 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 SYCE2Q6PIF2 218 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 BZW1Q7L1Q6 419 aaKnown RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 PHLDB2Q86SQ0 1253 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 RBM23Q86U06 439 aaKnown RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 CMTM8Q8IZV2 173 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 CPXM2Q8N436 756 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 TTC13Q8NBP0 860 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 UBLCP1Q8WVY7 318 aaPredicted RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 PPM1EQ8WY54 764 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 NDRG1Q92597 394 aaKnown RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 EDEM1Q92611 657 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 RUNDC3BQ96NL0 473 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 TRIM51Q9BSJ1 452 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 TRIM7Q9C029 511 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 NACA2Q9H009 215 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 DPH5Q9H2P9 285 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 CENPHQ9H3R5 247 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 TBC1D14Q9P2M4 693 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 MRPS23Q9Y3D9 190 aaKnown RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 FAM170AA1A519 330 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 TMEM110-MUSTN1A8MSY1 372 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 WASH4PA8MWX3 477 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 H3BRJ5 948 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 MOSPD3O75425 235 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 RFPL2O75678 378 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 GJB6O95452 261 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 RARAP10276 462 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 MYL4P12829 197 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 FSHRP23945 695 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 KDELR1P24390 212 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 MLLT6P55198 1093 aaPredicted RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 ATP11AP98196 1134 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 DR1Q01658 176 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 EFEMP1Q12805 493 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 IFRD2Q12894 506 aaPredicted RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 SEMA3BQ13214 749 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 C15orf59Q2T9L4 293 aaPredicted RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 CYP4V2Q6ZWL3 525 aaPredicted RBP9.81□□□□□ -0.84
C11orf54-201ENST00000331239 LRRC49Q8IUZ0 686 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 OR2W6PQ8NHA6 318 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 ALG3Q92685 438 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 BTBD6Q96KE9 485 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 FMO2Q99518 471 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 EPAS1Q99814 870 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 CLEC1BQ9P126 229 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 USTQ9Y2C2 406 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 NR2E1Q9Y466 385 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 FAM169AQ9Y6X4 670 aa9.81□□□□□ -0.84
C11orf54-201ENST00000331239 RFXAPO00287 272 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 HPDP32754 393 aaPredicted RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 ARL4AP40617 200 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 MDH1P40925 334 aaKnown RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 TAS2R40P59535 323 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 ZNF211Q13398 564 aaPredicted RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 DHX34Q14147 1143 aaKnown RBP9.8□□□□□ -0.84
C11orf54-201ENST00000331239 TFDP3Q5H9I0 405 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 MPP7Q5T2T1 576 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 B4GALNT4Q76KP1 1039 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 HS6ST3Q8IZP7 471 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 LZTR1Q8N653 840 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 KCTD6Q8NC69 237 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 RNF34Q969K3 372 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 NXPE3Q969Y0 559 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 BRD8Q9H0E9 1235 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 EPN3Q9H201 632 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 CCSER2Q9H7U1 834 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 ZWILCHQ9H900 591 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 RASAL2Q9UJF2 1139 aa9.8□□□□□ -0.84
C11orf54-201ENST00000331239 AP4E1Q9UPM8 1137 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms