RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SSR1P43307 286 aaKnown RBP17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 PRKCQQ04759 706 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 ZNF252P-AS1Q0IIN9 211 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 UBXN2BQ14CS0 331 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 BOLA3Q53S33 107 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 FBXO38Q6PIJ6 1188 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 CCDC105Q8IYK2 499 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 PJA1Q8NG27 643 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 TBCBQ99426 244 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 KRT12Q99456 494 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 ULBP1Q9BZM6 244 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 LRRC19Q9H756 370 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 PRDM16Q9HAZ2 1276 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 LRRC4Q9HBW1 653 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 FBRSL1Q9HCM7 1045 aaKnown RBP17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 LTB4R2Q9NPC1 389 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 PCYOX1Q9UHG3 505 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 RASAL2Q9UJF2 1139 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 SIT1Q9Y3P8 196 aa17.05■□□□□ 0.32
PDLIM1-201ENST00000329399 KIF26AQ9ULI4 1882 aaPredicted RBP17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 MYOFQ9NZM1 2061 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 PAPSS1O43252 624 aaPredicted RBP17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 TLR5O60602 858 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 TJP3O95049 919 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 MBL2P11226 248 aaPredicted RBP17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 TKTL1P51854 596 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 LMNB2Q03252 620 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 TCF15Q12870 199 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 CUL1Q13616 776 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 CCNI2Q6ZMN8 369 aaPredicted RBP17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 SYDE1Q6ZW31 735 aaPredicted RBP17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 PDZD8Q8NEN9 1154 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 GRK7Q8WTQ7 553 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 IRGQQ8WZA9 623 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 SLCO2A1Q92959 643 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 FAM129AQ9BZQ8 928 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 RAB17Q9H0T7 212 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 KIF9Q9HAQ2 790 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 CNGB3Q9NQW8 809 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 CFAP97Q9P2B7 532 aa17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 NDRG2Q9UN36 371 aaKnown RBP17.04■□□□□ 0.32
PDLIM1-201ENST00000329399 ZNF487B1APH4 448 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 GREM1O60565 184 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 LRCH4O75427 683 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 RARGP13631 454 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 TCF3P15923 654 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 MARCKSL1P49006 195 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 CLCN6P51797 869 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 KPNA1P52294 538 aaPredicted RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 DRG2P55039 364 aaKnown RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 TAS2R40P59535 323 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 RNASE9P60153 205 aaKnown RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 OGDHQ02218 1023 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 ZNF211Q13398 564 aaPredicted RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 RUNX3Q13761 415 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 EML3Q32P44 896 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 TFDP3Q5H9I0 405 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 PM20D1Q6GTS8 502 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 PSTKQ8IV42 348 aaKnown RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 MAP7D3Q8IWC1 876 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 SIX6OS1Q8N1H7 587 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 JOSD2Q8TAC2 188 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 CLEC4CQ8WTT0 213 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 TEKT4Q8WW24 435 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 RXFP2Q8WXD0 754 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 SHDQ96IW2 340 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 KLF16Q9BXK1 252 aaPredicted RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 OSBPL8Q9BZF1 889 aa17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 TLR8Q9NR97 1041 aaKnown RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 THG1LQ9NWX6 298 aaKnown RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 DUS2Q9NX74 493 aaKnown RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 UTP11Q9Y3A2 253 aaKnown RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 ZFHX2Q9C0A1 2572 aaPredicted RBP17.03■□□□□ 0.32
PDLIM1-201ENST00000329399 ANTXRLA6NF34 631 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 SPECC1L-ADORA2AF8WAN1 911 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 PFKLP17858 780 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 CTHP32929 405 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 ADIGQ0VDE8 80 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 PDK2Q15119 407 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 ZNF852Q6ZMS4 543 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 BEND5Q7L4P6 421 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 STRADAQ7RTN6 431 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 CCDC50Q8IVM0 306 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 SCUBE3Q8IX30 993 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 TTC13Q8NBP0 860 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 CSGALNACT1Q8TDX6 532 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 OSCP1Q8WVF1 389 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 FAM3CQ92520 227 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 CENPIQ92674 756 aaPredicted RBP17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 PNKPQ96T60 521 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 AP1M1Q9BXS5 423 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 GDF3Q9NR23 364 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 SMARCAL1Q9NZC9 954 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 TJP2Q9UDY2 1190 aa17.02■□□□□ 0.32
PDLIM1-201ENST00000329399 ATG2BQ96BY7 2078 aa17.02■□□□□ 0.31
PDLIM1-201ENST00000329399 FAM170AA1A519 330 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 YJEFN3A6XGL0 299 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 E7ENQ6 273 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms