RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 PLD4Q96BZ4 506 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 HAUS1Q96CS2 278 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 BTN2A3PQ96KV6 586 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 RAB6CQ9H0N0 254 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 DRG1Q9Y295 367 aaKnown RBP18.64■□□□□ 0.57
SYNE4-201ENST00000324444 NR2E1Q9Y466 385 aa18.64■□□□□ 0.57
SYNE4-201ENST00000324444 SLC12A8A0AV02 714 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 KCNU1A8MYU2 1149 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 DYNC1I1O14576 645 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 NDC80O14777 642 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 F11P03951 625 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 COILP38432 576 aaPredicted RBP18.63■□□□□ 0.57
SYNE4-201ENST00000324444 HARS2P49590 506 aaKnown RBP18.63■□□□□ 0.57
SYNE4-201ENST00000324444 TPI1P60174 286 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 DR1Q01658 176 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 SIX1Q15475 284 aaPredicted RBP18.63■□□□□ 0.57
SYNE4-201ENST00000324444 SLC9A4Q6AI14 798 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 LRRC31Q6UY01 552 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 EDAQ92838 391 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 SLCO2A1Q92959 643 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 AZIN2Q96A70 460 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 CSPG4P5Q96PW8 444 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 KCTD15Q96SI1 283 aaPredicted RBP18.63■□□□□ 0.57
SYNE4-201ENST00000324444 DDX50Q9BQ39 737 aaKnown RBP18.63■□□□□ 0.57
SYNE4-201ENST00000324444 FERMT1Q9BQL6 677 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 DCLK3Q9C098 648 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 RETREG1Q9H6L5 497 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 GPATCH2LQ9NWQ4 482 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 OR12D3Q9UGF7 316 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 UTP11Q9Y3A2 253 aaKnown RBP18.63■□□□□ 0.57
SYNE4-201ENST00000324444 TECTAO75443 2155 aa18.63■□□□□ 0.57
SYNE4-201ENST00000324444 NOTCH4Q99466 2003 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 ZNF197O14709 1029 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 MCF2LO15068 1137 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 FGF10O15520 208 aaPredicted RBP18.62■□□□□ 0.57
SYNE4-201ENST00000324444 IGLV3-27P01718 113 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 CD48P09326 243 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 SERPINB6P35237 376 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 CA9Q16790 459 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 ARHGAP15Q53QZ3 475 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 IFT20Q8IY31 132 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 FCRL2Q96LA5 508 aaPredicted RBP18.62■□□□□ 0.57
SYNE4-201ENST00000324444 DDX47Q9H0S4 455 aaKnown RBP18.62■□□□□ 0.57
SYNE4-201ENST00000324444 CATSPERBQ9H7T0 1116 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 CCSER2Q9H7U1 834 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 ARGLU1Q9NWB6 273 aaPredicted RBP18.62■□□□□ 0.57
SYNE4-201ENST00000324444 CWC15Q9P013 229 aaKnown RBP18.62■□□□□ 0.57
SYNE4-201ENST00000324444 DOCK6Q96HP0 2047 aa18.62■□□□□ 0.57
SYNE4-201ENST00000324444 C2CD4DB7Z1M9 353 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 NCAM2O15394 837 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 CREB3O43889 395 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 ECEL1O95672 775 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 LATS1O95835 1130 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 OAS1P00973 400 aaKnown RBP18.61■□□□□ 0.57
SYNE4-201ENST00000324444 IL4RP24394 825 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 GABRR2P28476 465 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 SLC11A2P49281 568 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 PGFP49763 221 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 EPHA5P54756 1037 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 MLLT6P55198 1093 aaPredicted RBP18.61■□□□□ 0.57
SYNE4-201ENST00000324444 ZXDAP98168 799 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 SEMA3BQ13214 749 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 XRCC4Q13426 336 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 BYSLQ13895 437 aaKnown RBP18.61■□□□□ 0.57
SYNE4-201ENST00000324444 RFX8Q6ZV50 586 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 GPR149Q86SP6 731 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 MIB1Q86YT6 1006 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 TMC8Q8IU68 726 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 LZTR1Q8N653 840 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 LRRN4CLQ8ND94 238 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 NKD2Q969F2 451 aaPredicted RBP18.61■□□□□ 0.57
SYNE4-201ENST00000324444 LRRC1Q9BTT6 524 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 LRRC3Q9BY71 257 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 C2orf16Q68DN1 1984 aa18.61■□□□□ 0.57
SYNE4-201ENST00000324444 TCRBV7S2A1N4TA0A589 114 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 CFAP69A5D8W1 941 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 MSI1O43347 362 aaKnown RBP18.6■□□□□ 0.57
SYNE4-201ENST00000324444 COCHO43405 550 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 LIASO43766 372 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 PAGE1O75459 146 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 RFPL2O75678 378 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 RHOXF2BP0C7M4 288 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 STIP1P31948 543 aaKnown RBP18.6■□□□□ 0.57
SYNE4-201ENST00000324444 MMRN1Q13201 1228 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 WDR93Q6P2C0 686 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 TRIM67Q6ZTA4 783 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 PLD5Q8N7P1 536 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 EIF1ADQ8N9N8 165 aaKnown RBP18.6■□□□□ 0.57
SYNE4-201ENST00000324444 PCDH19Q8TAB3 1148 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 C1orf54Q8WWF1 131 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.6■□□□□ 0.57
SYNE4-201ENST00000324444 TBC1D31Q96DN5 1066 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 RHOXF2Q9BQY4 288 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 PRKD2Q9BZL6 878 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 BRD8Q9H0E9 1235 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 IL21Q9HBE4 155 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 ZNF334Q9HCZ1 680 aaPredicted RBP18.6■□□□□ 0.57
SYNE4-201ENST00000324444 AMACRQ9UHK6 382 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 NUDT5Q9UKK9 219 aa18.6■□□□□ 0.57
SYNE4-201ENST00000324444 HACD1B0YJ81 288 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms