RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 STK10O94804 968 aaKnown RBP16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 DARSP14868 501 aaKnown RBP16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 VAV1P15498 845 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 TKTP29401 623 aaKnown RBP16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 POU5F1BQ06416 359 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 FAAP100Q0VG06 881 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 CEP128Q6ZU80 1094 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 IFNLR1Q8IU57 520 aaPredicted RBP16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 ULK2Q8IYT8 1036 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 TTC17Q96AE7 1141 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 PLEKHG4BQ96PX9 1271 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 FOXP3Q9BZS1 431 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 VPS11Q9H270 941 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 SLC24A2Q9UI40 661 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 MKI67P46013 3256 aaKnown RBP16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 INHBAP08476 426 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 PABPC4LP0CB38 370 aaKnown RBP16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 FAM200BP0CF97 657 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 IMPDH2P12268 514 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 GOT1P17174 413 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 IRX4P78413 519 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 ADIGQ0VDE8 80 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 SLC10A2Q12908 348 aaPredicted RBP16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 PTK7Q13308 1070 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 GRB14Q14449 540 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 MFSD10Q14728 455 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 DCAF4L1Q3SXM0 396 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 LPCAT4Q643R3 524 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 ZNF410Q86VK4 478 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 LCA5Q86VQ0 697 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 MPP4Q96JB8 637 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 FAM111AQ96PZ2 611 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 LGMNQ99538 433 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 SLC13A1Q9BZW2 595 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 CAPN14A8MX76 684 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 MAGEC1O60732 1142 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 BEST1O76090 585 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 MT-ND3P03897 115 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 ASLP04424 464 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 ACTR3P61158 418 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 MSLNQ13421 630 aaPredicted RBP16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 SNX17Q15036 470 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 PPP2R3CQ969Q6 453 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 TBCBQ99426 244 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 MED10Q9BTT4 135 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 USP29Q9HBJ7 922 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 IL1RAPL1Q9NZN1 696 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 TMCO1Q9UM00 188 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 AP4E1Q9UPM8 1137 aa16.01■□□□□ 0.15
SHROOM1-201ENST00000319854 F8W8V4 182 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 METTL18O95568 372 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 F7P08709 466 aaPredicted RBP16■□□□□ 0.15
SHROOM1-201ENST00000319854 FAM47CQ5HY64 1035 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 TMPRSS6Q8IU80 811 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 UNC5BQ8IZJ1 945 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 MPP5Q8N3R9 675 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 APPL2Q8NEU8 664 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 KBTBD7Q8WVZ9 684 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 PYDC1Q8WXC3 89 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 LPPQ93052 612 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 SLC17A6Q9P2U8 582 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 CXorf49A8MYA2 514 aaPredicted RBP16■□□□□ 0.15
SHROOM1-201ENST00000319854 SORBS2O94875 1100 aaKnown RBP16■□□□□ 0.15
SHROOM1-201ENST00000319854 BOLA3Q53S33 107 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 CES4AQ5XG92 561 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 KCNT2Q6UVM3 1135 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 DENND5BQ6ZUT9 1274 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 NET1Q7Z628 596 aaPredicted RBP16■□□□□ 0.15
SHROOM1-201ENST00000319854 CCNYQ8ND76 341 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 SERAC1Q96JX3 654 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 PARK7Q99497 189 aaKnown RBP16■□□□□ 0.15
SHROOM1-201ENST00000319854 ZC3H7BQ9UGR2 993 aaKnown RBP16■□□□□ 0.15
SHROOM1-201ENST00000319854 EFR3BQ9Y2G0 817 aa16■□□□□ 0.15
SHROOM1-201ENST00000319854 IQCA1LA6NCM1 817 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 I3L4J1 428 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 HUS1O60921 280 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 TM7SF2O76062 418 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 PGM3O95394 542 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 DLG1Q12959 904 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 TAZQ16635 292 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 C1orf146Q5VVC0 180 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 ADGRD1Q6QNK2 874 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 RASSF3Q86WH2 238 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 TP53INP2Q8IXH6 220 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 ST13P4Q8IZP2 240 aaPredicted RBP15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 NME8Q8N427 588 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 GSTCDQ8NEC7 633 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 ACSS3Q9H6R3 686 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 NRDE2Q9H7Z3 1164 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 E2F8A0AVK6 867 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 TTC36A6NLP5 189 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 COQ9O75208 318 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 STIP1P31948 543 aaKnown RBP15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 ETV4P43268 484 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 AP2B1P63010 937 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 WSCD1Q658N2 575 aa15.99■□□□□ 0.15
SHROOM1-201ENST00000319854 IQSEC1Q6DN90 963 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms