RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 BCLAF3A2AJT9 711 aaKnown RBP13.58□□□□□ -0.24
RUBCN-202ENST00000296343 COPEO14579 308 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 CHADO15335 359 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 HNRNPH1P31943 449 aaKnown RBP13.58□□□□□ -0.24
RUBCN-202ENST00000296343 LHX1P48742 406 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 SP3Q02447 781 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 RTN4RL1Q86UN2 441 aaPredicted RBP13.58□□□□□ -0.24
RUBCN-202ENST00000296343 MFSD3Q96ES6 412 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 PRR11Q96HE9 360 aaPredicted RBP13.58□□□□□ -0.24
RUBCN-202ENST00000296343 FAXDC2Q96IV6 333 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 ECT2Q9H8V3 914 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 WDR6Q9NNW5 1121 aaKnown RBP13.58□□□□□ -0.24
RUBCN-202ENST00000296343 RPS6KL1Q9Y6S9 549 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 H3BRJ5 948 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 TCEA3O75764 348 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 ODC1P11926 461 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 YWHAHQ04917 246 aaPredicted RBP13.58□□□□□ -0.24
RUBCN-202ENST00000296343 ZBTB17Q13105 803 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 MBTPS1Q14703 1052 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 PCSK7Q16549 785 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 PLEKHG4Q58EX7 1191 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 CMC1Q7Z7K0 106 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 METTL23Q86XA0 190 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 SMC1BQ8NDV3 1235 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 SH3TC2Q8TF17 1288 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 ATP2A3Q93084 1043 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 SMARCD1Q96GM5 515 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 GLT1D1Q96MS3 346 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 SRPK1Q96SB4 655 aaKnown RBP13.58□□□□□ -0.24
RUBCN-202ENST00000296343 AGAP2Q99490 1192 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 CAB39LQ9H9S4 337 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 FBXO6Q9NRD1 293 aaPredicted RBP13.58□□□□□ -0.24
RUBCN-202ENST00000296343 HAO1Q9UJM8 370 aa13.58□□□□□ -0.24
RUBCN-202ENST00000296343 ZMYND8Q9ULU4 1186 aaPredicted RBP13.58□□□□□ -0.24
RUBCN-202ENST00000296343 A0A0U1RQF3 1178 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 ACLYP53396 1101 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SLC5A3P53794 718 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 WASHC5Q12768 1159 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 STRADAQ7RTN6 431 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SPATA2LQ8IUW3 424 aaPredicted RBP13.57□□□□□ -0.24
RUBCN-202ENST00000296343 TET1Q8NFU7 2136 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 DENND1AQ8TEH3 1009 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SGSM3Q96HU1 749 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SIGLEC10Q96LC7 697 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 PPP1R36Q96LQ0 422 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 FOXP3Q9BZS1 431 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 NUMBLQ9Y6R0 609 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 A0A0A0MRY4 1105 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 IQANK1A0A1B0GTG1 560 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 E7ESA3 106 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 DAB1O75553 588 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 APOEP02649 317 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 PCSK1P29120 753 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 PDE1BQ01064 536 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 DLG2Q15700 870 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 NOMO2Q5JPE7 1267 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 CIR1Q86X95 450 aaPredicted RBP13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SPATA6LQ8N4H0 392 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 STAMBPL1Q96FJ0 436 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SPATA13Q96N96 652 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 CHRAC1Q9NRG0 131 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 ARMCX1Q9P291 453 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SLC24A2Q9UI40 661 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 USP3Q9Y6I4 520 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 DNAJC6O75061 913 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 CKBP12277 381 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 KCNA4P22459 653 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 CPA2P48052 419 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 MTDHQ86UE4 582 aaKnown RBP13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SLC26A11Q86WA9 606 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 DQX1Q8TE96 717 aaKnown RBP13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SLC44A1Q8WWI5 657 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 RSPH1Q8WYR4 309 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 CASP10Q92851 521 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 KLHL29Q96CT2 875 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SCLYQ96I15 445 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 QKIQ96PU8 341 aaKnown RBP eCLIP13.57□□□□□ -0.24
RUBCN-202ENST00000296343 SEPT5Q99719 369 aaPredicted RBP13.57□□□□□ -0.24
RUBCN-202ENST00000296343 MYLK2Q9H1R3 596 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 NMUR1Q9HB89 426 aa13.57□□□□□ -0.24
RUBCN-202ENST00000296343 PRUNE2Q8WUY3 3088 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 RPL17P18621 184 aaKnown RBP13.56□□□□□ -0.24
RUBCN-202ENST00000296343 NFKB1P19838 968 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 CCL23P55773 120 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 MAXP61244 160 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 ITKQ08881 620 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 MTFR1Q15390 333 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 BTBD8Q5XKL5 378 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 IL31Q6EBC2 164 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 CEP128Q6ZU80 1094 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 TNS4Q8IZW8 715 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 BANPQ8N9N5 519 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 ZNF669Q96BR6 464 aaPredicted RBP13.56□□□□□ -0.24
RUBCN-202ENST00000296343 FAM193BQ96PV7 902 aaPredicted RBP13.56□□□□□ -0.24
RUBCN-202ENST00000296343 EBNA1BP2Q99848 306 aaKnown RBP13.56□□□□□ -0.24
RUBCN-202ENST00000296343 VPS11Q9H270 941 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 MANSC1Q9H8J5 431 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 VANGL2Q9ULK5 521 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
RUBCN-202ENST00000296343 FAM237BA0A1B0GVD1 139 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms