RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ETFBP38117 255 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 PKNOX1P55347 436 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 DNAL1Q4LDG9 190 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 C9orf131Q5VYM1 1079 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 PIWIL2Q8TC59 973 aaKnown RBP16.32■□□□□ 0.2
SMAD6-201ENST00000288840 UCMAQ8WVF2 138 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 MFSD3Q96ES6 412 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 ZBED3Q96IU2 234 aaPredicted RBP16.32■□□□□ 0.2
SMAD6-201ENST00000288840 SLC5A4Q9NY91 659 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 DTLQ9NZJ0 730 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 TEX264Q9Y6I9 313 aa16.32■□□□□ 0.2
SMAD6-201ENST00000288840 C3orf70A6NLC5 250 aaPredicted RBP16.31■□□□□ 0.2
SMAD6-201ENST00000288840 CD4P01730 458 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 BTKQ06187 659 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 RALGPS1Q5JS13 557 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 ELMO2Q96JJ3 720 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 ZMAT2Q96NC0 199 aaKnown RBP16.31■□□□□ 0.2
SMAD6-201ENST00000288840 EPAS1Q99814 870 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 WDR55Q9H6Y2 383 aaPredicted RBP16.31■□□□□ 0.2
SMAD6-201ENST00000288840 RUVBL2Q9Y230 463 aaKnown RBP16.31■□□□□ 0.2
SMAD6-201ENST00000288840 SBF2Q86WG5 1849 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 A0A0A0MRY4 1105 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 ITM2AO43736 263 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 ITGA2BP08514 1039 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 ATP6V1B1P15313 513 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 ERCC2P18074 760 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 SKIV2L2P42285 1042 aaKnown RBP16.31■□□□□ 0.2
SMAD6-201ENST00000288840 MAP3K10Q02779 954 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 MPP3Q13368 585 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 PQLC3Q8N755 202 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 NIPA2Q8N8Q9 360 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 SPATA13Q96N96 652 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 VAPBO95292 243 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 OAS1P00973 400 aaKnown RBP16.31■□□□□ 0.2
SMAD6-201ENST00000288840 NAGLUP54802 743 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 OCRLQ01968 901 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 PARP6Q2NL67 630 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 FSCBQ5H9T9 825 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 CATSPER2Q96P56 530 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 AGAP2Q99490 1192 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 EFR3BQ9Y2G0 817 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 PSAT1Q9Y617 370 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 AK5Q9Y6K8 562 aa16.31■□□□□ 0.2
SMAD6-201ENST00000288840 CYP3A5P20815 502 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 ACADSBP45954 432 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 KCNK16Q96T55 309 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 TBX10O75333 385 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 T-ENOLP0DO92 83 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 TSPAN8P19075 237 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 FDFT1P37268 417 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 SV2CQ496J9 727 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 THEMIS2Q5TEJ8 643 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 ACAD11Q709F0 780 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 METTL23Q86XA0 190 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMAD6-201ENST00000288840 FBXO27Q8NI29 283 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 MIPEPQ99797 713 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 PGAP2Q9UHJ9 254 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 BUD23O43709 281 aaKnown RBP16.3■□□□□ 0.2
SMAD6-201ENST00000288840 BPGMP07738 259 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 EPHA3P29320 983 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 GRIK1P39086 918 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 CACNA2D1P54289 1103 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 GNASQ5JWF2 1037 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 SPDYAQ5MJ70 313 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 SYPL2Q5VXT5 272 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 PACS1Q6VY07 963 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 PTAR1Q7Z6K3 402 aaPredicted RBP16.3■□□□□ 0.2
SMAD6-201ENST00000288840 CAND1Q86VP6 1230 aaKnown RBP16.3■□□□□ 0.2
SMAD6-201ENST00000288840 ANKRD52Q8NB46 1076 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 PDCD6IPQ8WUM4 868 aaKnown RBP16.3■□□□□ 0.2
SMAD6-201ENST00000288840 FRMD8Q9BZ67 464 aaPredicted RBP16.3■□□□□ 0.2
SMAD6-201ENST00000288840 POPDC2Q9HBU9 364 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 TMEM216Q9P0N5 145 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 SOX13Q9UN79 622 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
SMAD6-201ENST00000288840 DPPA5A6NC42 116 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 GM2AP17900 193 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 SLC10A2Q12908 348 aaPredicted RBP16.29■□□□□ 0.2
SMAD6-201ENST00000288840 CTBP1Q13363 440 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 KYAT1Q16773 422 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 DCAF4L1Q3SXM0 396 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMAD6-201ENST00000288840 RNF220Q5VTB9 566 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 TRNP1Q6NT89 227 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 TFAP2DQ7Z6R9 452 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 B3GALNT2Q8NCR0 500 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 SPDYE1Q8NFV5 336 aaPredicted RBP16.29■□□□□ 0.2
SMAD6-201ENST00000288840 FGD4Q96M96 766 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 ZNF670Q9BS34 389 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 KCNK4Q9NYG8 393 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 DONSONQ9NYP3 566 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 C10orf71Q711Q0 1435 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 CXCL11O14625 94 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 CCNB1P14635 433 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.25e-7■■□□□ 13.9
SMAD6-201ENST00000288840 GP5P40197 560 aa16.29■□□□□ 0.2
SMAD6-201ENST00000288840 GSCP56915 257 aaPredicted RBP16.29■□□□□ 0.2
SMAD6-201ENST00000288840 MRPS35P82673 323 aaKnown RBP16.29■□□□□ 0.2
SMAD6-201ENST00000288840 CYTH1Q15438 398 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms