RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 MGARPQ8TDB4 240 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 DENND1AQ8TEH3 1009 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 CKAP2Q8WWK9 683 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 CASP10Q92851 521 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 CFAP36Q96G28 342 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 SMOC2Q9H3U7 446 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 NMUR1Q9HB89 426 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 XAB2Q9HCS7 855 aaKnown RBP9.87□□□□□ -0.83
TRIM55-201ENST00000276573 MARCH5Q9NX47 278 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 NKIRAS1Q9NYS0 192 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 IL37Q9NZH6 218 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 SEPT10Q9P0V9 454 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 ZC3H7BQ9UGR2 993 aaKnown RBP9.87□□□□□ -0.83
TRIM55-201ENST00000276573 SFMBT1Q9UHJ3 866 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 GGA2Q9UJY4 613 aa9.87□□□□□ -0.83
TRIM55-201ENST00000276573 PCNTO95613 3336 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 ZNF638Q14966 1978 aaKnown RBP9.86□□□□□ -0.83
TRIM55-201ENST00000276573 A0A1W2PQH9 124 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 FAM47DPA6NHR8 397 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 TRIM66O15016 1216 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PRPF4O43172 522 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRIM55-201ENST00000276573 HOXA2O43364 376 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PQBP1O60828 265 aaKnown RBP9.86□□□□□ -0.83
TRIM55-201ENST00000276573 C1QAP02745 245 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 GALTP07902 379 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 MLNP12872 115 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 MX2P20592 715 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 GRIA1P42261 906 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PPIDQ08752 370 aaKnown RBP9.86□□□□□ -0.83
TRIM55-201ENST00000276573 GALNT2Q10471 571 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 KBTBD12Q3ZCT8 623 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 ZNF280DQ6N043 979 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SPATS2Q86XZ4 545 aaKnown RBP9.86□□□□□ -0.83
TRIM55-201ENST00000276573 LRRC34Q8IZ02 419 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 NPWQ8N729 165 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 DYDC1Q8WWB3 177 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SLC44A1Q8WWI5 657 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SCLYQ96I15 445 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 EBNA1BP2Q99848 306 aaKnown RBP9.86□□□□□ -0.83
TRIM55-201ENST00000276573 TMEM175Q9BSA9 504 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 CEP41Q9BYV8 373 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SIK2Q9H0K1 926 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 FBXO44Q9H4M3 255 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PLAC1Q9HBJ0 212 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 TMEM51Q9NW97 253 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 IGSF9Q9P2J2 1179 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 TTLL3Q9Y4R7 772 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 TBC1D4O60343 1298 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SPAG7O75391 227 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PAGE1O75459 146 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 CXCL10P02778 98 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 CCL5P13501 91 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PRKCHP24723 683 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PTPN3P26045 913 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 CCR1P32246 355 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 STX2P32856 288 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SERPINB6P35237 376 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 GPR15P49685 360 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PPP2R5DQ14738 602 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 FUT10Q6P4F1 479 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 LRRC8BQ6P9F7 803 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SLC39A5Q6ZMH5 540 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PRPF39Q86UA1 669 aaKnown RBP9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PDCD7Q8N8D1 485 aaKnown RBP9.86□□□□□ -0.83
TRIM55-201ENST00000276573 ATAD1Q8NBU5 361 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 MZB1Q8WU39 189 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 HDAC11Q96DB2 347 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SGSM3Q96HU1 749 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SEC16BQ96JE7 1060 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 B3GALT6Q96L58 329 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PGLYRP2Q96PD5 576 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SMC6Q96SB8 1091 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 RNF208Q9H0X6 261 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 KIF9Q9HAQ2 790 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 SSU72Q9NP77 194 aaKnown RBP9.86□□□□□ -0.83
TRIM55-201ENST00000276573 EIF2B3Q9NR50 452 aaKnown RBP9.86□□□□□ -0.83
TRIM55-201ENST00000276573 OSER1Q9NX31 292 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 HCSTQ9UBK5 93 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 NUDT5Q9UKK9 219 aa9.86□□□□□ -0.83
TRIM55-201ENST00000276573 PATJQ8NI35 1801 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 SDR42E2A6NKP2 422 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 TBKBP1A7MCY6 615 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 KCNU1A8MYU2 1149 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 NT5C1B-RDH14C9J2C7 533 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 F5H423 210 aaPredicted RBP9.85□□□□□ -0.83
TRIM55-201ENST00000276573 KCNK1O00180 336 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 MTSS1O43312 755 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 CPP00450 1065 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 APOEP02649 317 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 VIMP08670 466 aaKnown RBP9.85□□□□□ -0.83
TRIM55-201ENST00000276573 SRGAP2BP0DMP2 458 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 PSMB4P28070 264 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 HTR7P34969 479 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 GARSP41250 739 aaKnown RBP9.85□□□□□ -0.83
TRIM55-201ENST00000276573 ATN1P54259 1190 aaPredicted RBP9.85□□□□□ -0.83
TRIM55-201ENST00000276573 CCL23P55773 120 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 ARPP19P56211 112 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 WDR4P57081 412 aaKnown RBP9.85□□□□□ -0.83
TRIM55-201ENST00000276573 USP46P62068 366 aa9.85□□□□□ -0.83
TRIM55-201ENST00000276573 ELAVL2Q12926 359 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms