RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 TOP6BLQ8N6T0 577 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 STKLD1Q8NE28 680 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 OR10T2Q8NGX3 314 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 TTC25Q96NG3 672 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 RBM15Q96T37 977 aaKnown RBP eCLIP13.03□□□□□ -0.325e-6■■■□□ 14.8
PRPF6-201ENST00000266079 MRPL9Q9BYD2 267 aaKnown RBP13.03□□□□□ -0.32
PRPF6-201ENST00000266079 TAS2R1Q9NYW7 299 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 HEY2Q9UBP5 337 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 DCTN4Q9UJW0 460 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 NEU2Q9Y3R4 380 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.03□□□□□ -0.32
PRPF6-201ENST00000266079 TRIOBPQ9H2D6 2365 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 POC1B-GALNT4F8VUJ3 575 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 GOLGA8SH3BPF8 625 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 TYROBPO43914 113 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 CETN2P41208 172 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 NOMO3P69849 1222 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 YWHAHQ04917 246 aaPredicted RBP13.03□□□□□ -0.32
PRPF6-201ENST00000266079 PRSS55Q6UWB4 352 aaPredicted RBP13.03□□□□□ -0.32
PRPF6-201ENST00000266079 RINLQ6ZS11 566 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 CEP128Q6ZU80 1094 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
PRPF6-201ENST00000266079 RFWD2Q8NHY2 731 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 AUTS2Q8WXX7 1259 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 FOXP3Q9BZS1 431 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 CRTAC1Q9NQ79 661 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 IL1RAPL1Q9NZN1 696 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 ZSCAN9O15535 394 aaPredicted RBP13.02□□□□□ -0.32
PRPF6-201ENST00000266079 COQ9O75208 318 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 VDRP11473 427 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 PTPN1P18031 435 aaKnown RBP13.02□□□□□ -0.32
PRPF6-201ENST00000266079 FUT10Q6P4F1 479 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 TTC30AQ86WT1 665 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 METTL23Q86XA0 190 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 CCDC89Q8N998 374 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 UROC1Q96N76 676 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 RTP3Q9BQQ7 232 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 HERPUD2Q9BSE4 406 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 CWH43Q9H720 699 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 DNAAF2Q9NVR5 837 aaKnown RBP13.02□□□□□ -0.32
PRPF6-201ENST00000266079 UVRAGQ9P2Y5 699 aa13.02□□□□□ -0.32
PRPF6-201ENST00000266079 INPPL1O15357 1258 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 SH3BGRP55822 239 aaPredicted RBP13.02□□□□□ -0.33
PRPF6-201ENST00000266079 IFRD2Q12894 506 aaPredicted RBP13.02□□□□□ -0.33
PRPF6-201ENST00000266079 RTP2Q5QGT7 225 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 KCNT2Q6UVM3 1135 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 LRRTM3Q86VH5 581 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 SUSD3Q96L08 255 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 OLFM3Q96PB7 478 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 PREBQ9HCU5 417 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 TMLHEQ9NVH6 421 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 TBC1D30Q9Y2I9 924 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 DNAJC6O75061 913 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 GJB5O95377 273 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 UNGP13051 313 aaPredicted RBP13.02□□□□□ -0.33
PRPF6-201ENST00000266079 ACAD10Q6JQN1 1059 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 IZUMO2Q6UXV1 221 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 ANKS1BQ7Z6G8 1248 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 ZCCHC9Q8N567 271 aaKnown RBP13.02□□□□□ -0.33
PRPF6-201ENST00000266079 PCED1BQ96HM7 432 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 CPXM1Q96SM3 734 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 COLEC11Q9BWP8 271 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 ZNF518BQ9C0D4 1074 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 MIS12Q9H081 205 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 SAYSD1Q9NPB0 183 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 GALNT8Q9NY28 637 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 HESX1Q9UBX0 185 aa13.02□□□□□ -0.33
PRPF6-201ENST00000266079 R3HDM2Q9Y2K5 976 aaKnown RBP13.02□□□□□ -0.33
PRPF6-201ENST00000266079 TLL1O43897 1013 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 BEST1O76090 585 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 PFKMP08237 780 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 WARSP23381 471 aaKnown RBP13.01□□□□□ -0.33
PRPF6-201ENST00000266079 MAGEA8P43361 318 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 MAGEA10P43363 369 aaPredicted RBP13.01□□□□□ -0.33
PRPF6-201ENST00000266079 CENPCQ03188 943 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 OVGP1Q12889 678 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 KRT72Q14CN4 511 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 PTPN20Q4JDL3 420 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 VARS2Q5ST30 1063 aaKnown RBP13.01□□□□□ -0.33
PRPF6-201ENST00000266079 MARK2Q7KZI7 788 aaKnown RBP13.01□□□□□ -0.33
PRPF6-201ENST00000266079 ARHGAP24Q8N264 748 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 TMEM35BQ8NCS4 154 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 TNIP3Q96KP6 325 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 KCNK16Q96T55 309 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 B3GNT5Q9BYG0 378 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 A0A0G2JND7 137 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 A0A1W2PPM1 405 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 F8W8V4 182 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 GABRDO14764 452 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 MED7O43513 233 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 GRAP2O75791 330 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 ESRRAP11474 423 aaPredicted RBP13.01□□□□□ -0.33
PRPF6-201ENST00000266079 AMPD1P23109 780 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 RAP1GDS1P52306 607 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 DSG1Q02413 1049 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 KIAA1841Q6NSI8 718 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 UNC93AQ86WB7 457 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 NDRG1Q92597 394 aaKnown RBP13.01□□□□□ -0.33
PRPF6-201ENST00000266079 PLEKHG4BQ96PX9 1271 aa13.01□□□□□ -0.33
PRPF6-201ENST00000266079 ECSITQ9BQ95 431 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms