RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PMM2O15305 246 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 CBFA2T3O75081 653 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 NDUFS2O75306 463 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 CYBBP04839 570 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 ZNF883P0CG24 379 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 SETSIPP0DME0 302 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 MAOBP27338 520 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 SLC8A3P57103 927 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 DAOAP59103 153 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 ZNF445P59923 1031 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 FKBP3Q00688 224 aaKnown RBP10.76□□□□□ -0.69
VPS50-201ENST00000251739 E2F5Q15329 346 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 ZNF423Q2M1K9 1284 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 PLEKHG6Q3KR16 790 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 SGO2Q562F6 1265 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 SYCP2LQ5T4T6 812 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 ZNF658Q5TYW1 1059 aaPredicted RBP10.76□□□□□ -0.69
VPS50-201ENST00000251739 BSPRYQ5W0U4 402 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 LCLAT1Q6UWP7 414 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 ADIPOR2Q86V24 386 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 FMNL3Q8IVF7 1028 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 ZCCHC9Q8N567 271 aaKnown RBP10.76□□□□□ -0.69
VPS50-201ENST00000251739 BAHD1Q8TBE0 780 aaPredicted RBP10.76□□□□□ -0.69
VPS50-201ENST00000251739 ZCCHC14Q8WYQ9 949 aaKnown RBP10.76□□□□□ -0.69
VPS50-201ENST00000251739 TFAP2BQ92481 460 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 SIPA1Q96FS4 1042 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 GSDMAQ96QA5 445 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 GPR174Q9BXC1 333 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 IRX2Q9BZI1 471 aaPredicted RBP10.76□□□□□ -0.69
VPS50-201ENST00000251739 ZDHHC5Q9C0B5 715 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 CNGB3Q9NQW8 809 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 RALYQ9UKM9 306 aaKnown RBP10.76□□□□□ -0.69
VPS50-201ENST00000251739 ARID1BQ8NFD5 2236 aaPredicted RBP10.75□□□□□ -0.69
VPS50-201ENST00000251739 TRIM49BA6NDI0 452 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 SRRM3A6NNA2 597 aaPredicted RBP10.75□□□□□ -0.69
VPS50-201ENST00000251739 METTL12A8MUP2 240 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 MEI4A8MW99 385 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 MSI1O43347 362 aaKnown RBP10.75□□□□□ -0.69
VPS50-201ENST00000251739 TIMM44O43615 452 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 SH3BP5O60239 455 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 EPHX1P07099 455 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 PAEPP09466 180 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 VDRP11473 427 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 GNSP15586 552 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 TBXAS1P24557 533 aaPredicted RBP10.75□□□□□ -0.69
VPS50-201ENST00000251739 OXTRP30559 389 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 SGSHP51688 502 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 YWHAEP62258 255 aaKnown RBP10.75□□□□□ -0.69
VPS50-201ENST00000251739 LRRC63Q05C16 580 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 PTPRNQ16849 979 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 MPPE1Q53F39 396 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 FAM133BQ5BKY9 247 aaKnown RBP10.75□□□□□ -0.69
VPS50-201ENST00000251739 DCAF17Q5H9S7 520 aaPredicted RBP10.75□□□□□ -0.69
VPS50-201ENST00000251739 ADGRF1Q5T601 910 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 TCERG1LQ5VWI1 586 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 ANKRD40Q6AI12 368 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 SERPINA13PQ6UXR4 307 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 GLRX5Q86SX6 157 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 NAXDQ8IW45 347 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 RGL4Q8IZJ4 473 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 OR2T3Q8NH03 318 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 LMO3Q8TAP4 145 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 WFDC5Q8TCV5 224 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 WFIKKN2Q8TEU8 576 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 DDI1Q8WTU0 396 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 SLC35F5Q8WV83 523 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 ADAMTS14Q8WXS8 1223 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 EDEM1Q92611 657 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 PRCCQ92733 491 aaPredicted RBP10.75□□□□□ -0.69
VPS50-201ENST00000251739 LMLNQ96KR4 655 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 CAMK1GQ96NX5 476 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 CIPCQ9C0C6 399 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 LRRC4Q9HBW1 653 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 ABCC13Q9NSE7 274 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 RMND1Q9NWS8 449 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 HESX1Q9UBX0 185 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 ARMCX3Q9UH62 379 aaPredicted RBP10.75□□□□□ -0.69
VPS50-201ENST00000251739 SFMBT1Q9UHJ3 866 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 KIAA1257Q9ULG3 409 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.75□□□□□ -0.69
VPS50-201ENST00000251739 SLCO1B1Q9Y6L6 691 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 LOC400499M0QZD8 3231 aa10.75□□□□□ -0.69
VPS50-201ENST00000251739 COL5A1P20908 1838 aaPredicted RBP10.74□□□□□ -0.69
VPS50-201ENST00000251739 ADAMTS20P59510 1910 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 C10orf142B7Z368 130 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 SYNCRIPO60506 623 aaKnown RBP10.74□□□□□ -0.69
VPS50-201ENST00000251739 DKK1O94907 266 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 HLA-EP13747 358 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 CD19P15391 556 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 FMO5P49326 533 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 HARS2P49590 506 aaKnown RBP10.74□□□□□ -0.69
VPS50-201ENST00000251739 RING1Q06587 406 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 TRIP6Q15654 476 aaKnown RBP10.74□□□□□ -0.69
VPS50-201ENST00000251739 MPP7Q5T2T1 576 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 DCAF12L1Q5VU92 463 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 PMF1Q6P1K2 205 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 FOXR2Q6PJQ5 311 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 DBX2Q6ZNG2 339 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 SIX6OS1Q8N1H7 587 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 CHCHD4Q8N4Q1 142 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms