RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 DYMQ7RTS9 669 aa12.53□□□□□ -0.4
RFPL3-201ENST00000249007 SYCP3Q8IZU3 236 aa12.53□□□□□ -0.4
RFPL3-201ENST00000249007 GPD1LQ8N335 351 aa12.53□□□□□ -0.4
RFPL3-201ENST00000249007 RASSF8Q8NHQ8 419 aa12.53□□□□□ -0.4
RFPL3-201ENST00000249007 DDI1Q8WTU0 396 aa12.53□□□□□ -0.4
RFPL3-201ENST00000249007 TIGD1Q96MW7 591 aa12.53□□□□□ -0.4
RFPL3-201ENST00000249007 PABPC3Q9H361 631 aaKnown RBP12.53□□□□□ -0.4
RFPL3-201ENST00000249007 FBXL12Q9NXK8 326 aa12.53□□□□□ -0.4
RFPL3-201ENST00000249007 SATB2Q9UPW6 733 aa12.53□□□□□ -0.4
RFPL3-201ENST00000249007 ITPR3Q14573 2671 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 RARGP13631 454 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 ITGB6P18564 788 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 SURF1Q15526 300 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 TRAPPC11Q7Z392 1133 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 WDR49Q8IV35 697 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 FUKQ8N0W3 1084 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 ZMIZ2Q8NF64 920 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 OR2T34Q8NGX1 318 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 AK8Q96MA6 479 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 SLC46A1Q96NT5 459 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 CCNL2Q96S94 520 aaPredicted RBP12.52□□□□□ -0.41
RFPL3-201ENST00000249007 SMOQ99835 787 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 ABCG4Q9H172 646 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
RFPL3-201ENST00000249007 TBC1D7Q9P0N9 293 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 SERGEFQ9UGK8 458 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 SCML1Q9UN30 329 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 SCML2Q9UQR0 700 aa12.52□□□□□ -0.41
RFPL3-201ENST00000249007 A0A1B0GVM2 712 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 BEST1O76090 585 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 GCNT3O95395 438 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 CST3P01034 146 aaPredicted RBP12.51□□□□□ -0.41
RFPL3-201ENST00000249007 PTMAP06454 111 aaKnown RBP12.51□□□□□ -0.41
RFPL3-201ENST00000249007 FAM87AP0C7U9 286 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 CORO1AP31146 461 aaKnown RBP12.51□□□□□ -0.41
RFPL3-201ENST00000249007 MAP3K7CLP57077 242 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 ANAPC15P60006 121 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 CLN3Q13286 438 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 ARL6IP4Q66PJ3 421 aaKnown RBP12.51□□□□□ -0.41
RFPL3-201ENST00000249007 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 SPATS2Q86XZ4 545 aaKnown RBP12.51□□□□□ -0.41
RFPL3-201ENST00000249007 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 LARP4BQ92615 738 aaKnown RBP12.51□□□□□ -0.41
RFPL3-201ENST00000249007 EXTL1Q92935 676 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 DCLK3Q9C098 648 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 RSPH9Q9H1X1 276 aaPredicted RBP12.51□□□□□ -0.41
RFPL3-201ENST00000249007 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 WDR70Q9NW82 654 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 SEL1LQ9UBV2 794 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 POLQO75417 2590 aa12.51□□□□□ -0.41
RFPL3-201ENST00000249007 KIF26BQ2KJY2 2108 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 A0A1W2PP55 124 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 A0A1W2PQH9 124 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 ZNF233A6NK53 670 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 ITGB2P05107 769 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 HMBSP08397 361 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 SFTPCP11686 197 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 HLA-FP30511 346 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 CCR5P51681 352 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 INHBCP55103 352 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 COG7P83436 770 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 SFSWAPQ12872 951 aaKnown RBP12.5□□□□□ -0.41
RFPL3-201ENST00000249007 ISXQ2M1V0 245 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 RILPL1Q5EBL4 403 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 GPRIN1Q7Z2K8 1008 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 TMC6Q7Z403 805 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 CBWD2Q8IUF1 395 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 DENND1CQ8IV53 801 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 SLC25A45Q8N413 288 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 MFSD2AQ8NA29 543 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 WFIKKN2Q8TEU8 576 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 LLPHQ9BRT6 129 aaKnown RBP12.5□□□□□ -0.41
RFPL3-201ENST00000249007 OSBPL2Q9H1P3 480 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 NEUROG2Q9H2A3 272 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.5□□□□□ -0.41
RFPL3-201ENST00000249007 NAGPAQ9UK23 515 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 AGO1Q9UL18 857 aaKnown RBP12.5□□□□□ -0.41
RFPL3-201ENST00000249007 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
RFPL3-201ENST00000249007 A0A1W2PNU3 283 aaPredicted RBP12.49□□□□□ -0.41
RFPL3-201ENST00000249007 RNASEH2AO75792 299 aaKnown RBP12.49□□□□□ -0.41
RFPL3-201ENST00000249007 GP1BAP07359 652 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 DLDP09622 509 aaKnown RBP12.49□□□□□ -0.41
RFPL3-201ENST00000249007 DLATP10515 647 aaKnown RBP12.49□□□□□ -0.41
RFPL3-201ENST00000249007 CKMT1AP12532 417 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 CCDC130P13994 396 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 CASP5P51878 434 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 USP53Q70EK8 1073 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 CHST9Q7L1S5 443 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 CPXM2Q8N436 756 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 OR4C6Q8NH72 309 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 SLC2A14Q8TDB8 520 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 HPS3Q969F9 1004 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 JAKMIP2Q96AA8 810 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 OMDQ99983 421 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 SMYD3Q9H7B4 428 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 CSNK1G1Q9HCP0 422 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 SUN2Q9UH99 717 aa12.49□□□□□ -0.41
RFPL3-201ENST00000249007 ATXN7L1Q9ULK2 861 aaPredicted RBP12.49□□□□□ -0.41
RFPL3-201ENST00000249007 FZD4Q9ULV1 537 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms